Publications 2011

Peter Albers and Marco Mazzucchelli: Periodic bounce orbits of prescribed energy
In: International mathematics research notices, 2011 (2011) 14, p. 3289-3314
Bibtex DOI: 10.1093/imrn/rnq193

John Andersson and Hayk Mikayelyan: \(C^{1,\alpha}\) regularity for solutions to the \(p\)-harmonic thin obstacle problem
In: International mathematics research notices, 2011 (2011) 1, p. 119-134
Bibtex MIS-Preprint: 120/2006 DOI: 10.1093/imrn/rnq061
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Fatihcan M. Atay: Synchronization and emergence in complex systems
In: Pramana, 77 (2011) 5, p. 855-863
Bibtex DOI: 10.1007/s12043-011-0181-5

Fatihcan M. Atay and Jürgen Jost: Qualitative inference in dynamical systems
In: Handbook of statistical systems biology / Michael P. H. Stumpf... (eds.)
Chichester : Wiley & Sons, 2011. - P. 339-358
Bibtex DOI: 10.1002/9781119970606.ch17

Markus Aurada ; Michael Ebner ; Michael Feischl ; Samuel Ferraz-Leite ; Petra Goldenits ; Michael Karkulik ; Markus Mayr and Dirk Praetorius (eds.): HILBERT : a Matlab implementation of adaptive 2D-BEM
Wien : Institute of Analysis and Scientific Computing; Vienna University of Technology, 2011. - 28 p.
(ASC Report ; 24/2011)
ISBN 978-3-902627-04-9
Bibtex LINK: http://www.asc.tuwien.ac.at/preprint/2011/asc24x2011.pdf
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Luchezar L. Avramov ; Mark Green ; Craig Huneke ; Karen E. Smith and Bernd Sturmfels (eds.): Trends in commutative algebra : [Based on lectures presented at the MSRI introductory workshop on commutative algebra held at the Mathematical Sciences Research Institute, Berkeley, CA, USA, September 9-13, 2002]
Reprint of the 2004 hardback edition. - New York : Cambridge University Press, 2011. - X, 254 p.
(Mathematical sciences research institute publications ; 51)
ISBN 978-0-521-16872-4 ISBN 978-0-511-15945-9
Bibtex

Nihat Ay ; Markus Müller and Arleta Szkoła: Effective complexity of stationary process realizations
In: Entropy, 13 (2011) 6, p. 1200-1211
Bibtex MIS-Preprint: 2/2010 DOI: 10.3390/e13061200 ARXIV: http://arxiv.org/abs/1001.2686
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Nihat Ay ; Eckehard Olbrich ; Nils Bertschinger and Jürgen Jost: A geometric approach to complexity
In: Chaos, 21 (2011) 3, 037103
Bibtex MIS-Preprint: 53/2011 DOI: 10.1063/1.3638446
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Lehel Banjai and Volker Gruhne: Efficient long-time computations of time-domain boundary integrals for 2D and dissipative wave equation
In: Journal of computational and applied mathematics, 235 (2011) 14, p. 4207-4220
Bibtex MIS-Preprint: 65/2010 DOI: 10.1016/j.cam.2011.03.015
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Lehel Banjai and Christian Lubich: An error analysis of Runge-Kutta convolution quadrature
In: BIT : numerical mathematics, 51 (2011) 3, p. 483-496
Bibtex MIS-Preprint: 27/2010 DOI: 10.1007/s10543-011-0311-y
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Lehel Banjai ; Christian Lubich and Jens Markus Melenk: Runge-Kutta convolution quadrature for operators arising in wave propagation
In: Numerische Mathematik, 119 (2011) 1, p. 1-20
Bibtex MIS-Preprint: 59/2010 DOI: 10.1007/s00211-011-0378-z
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Lehel Banjai and Ya Zhang: A family of efficient numerical solvers of time domain boundary integral equations
In: Forum Acusticum 2011, Aalborg, Denmark : 6th European Congress on Acoustics, 27 June-01 July 2011, Aalborg, Denmark
Stutgart : Hirzel, 2011
(Acta acustica united with Acustica ; 97, Suppl. 1)
Bibtex

Randolph E. Bank ; Wolfgang Hackbusch and Gabriel Wittum: Schnelle Löser für partielle Differentialgleichungen = Fast solvers for partial differential equations ; abstracts from the workshop held May 22 - 28, 2011 ; report no. 28/2011
In: Oberwolfach reports, 8 (2011) 2, p. 1511-1571
Bibtex DOI: 10.4171/OWR/2011/28 LINK: https://publications.mfo.de/handle/mfo/3243
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Andrei Barysenka ; Andreas W. M. Dress and Walter Schubert: A comparative method for analysing Toponome image stacks
In: East Asian journal on applied mathematics, 1 (2011) 1, p. 35-48
Bibtex DOI: 10.4208/eajam.280909.270410a

Frank Bauer: Eigenvalues of directed and undirected graphs and their applications
Dissertation, Universität Leipzig, 2011
Bibtex

Udo Benedikt ; Alexander A. Auer ; Mike Espig and Wolfgang Hackbusch: Tensor decomposition in post-Hartree Fock methods. Pt. 1 : Two-electron integrals and MP2
In: The journal of chemical physics, 134 (2011) 5, 054118
Bibtex MIS-Preprint: 63/2010 DOI: 10.1063/1.3514201
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Thomas Blesgen and Isaac Vikram Chenchiah: A generalized Cahn-Hilliard equation incorporating geometrically linear elasticity
In: Interfaces and free boundaries, 13 (2011) 1, p. 1-27
Bibtex DOI: 10.4171/IFB/246

Markus Borris: Quantum field theory on non-commutative spacetimes
Dissertation, Universität Leipzig, 2011
Bibtex LINK: http://nbn-resolving.de/urn:nbn:de:bsz:15-qucosa-67788
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Yann Brenier ; Felix Otto and Christian Seis: Upper bounds on coarsening rates in demixing binary viscous liquids
In: SIAM journal on mathematical analysis, 43 (2011) 1, p. 114-134
Bibtex DOI: 10.1137/090775142
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Sarah B. Brodsky and Bernd Sturmfels: Tropical quadrics through three points
In: Linear algebra and its applications, 435 (2011) 7, p. 1778-1785
Bibtex DOI: 10.1016/j.laa.2010.05.004 ARXIV: http://arxiv.org/abs/1002.0603
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F. Cagnetti and Lucia Scardia: An extension theorem in SBV and an application to the homogenization of the Mumford-Shah functional in perforated domains
In: Journal de mathématiques pures et appliquées, 95 (2011) 4, p. 349-381
Bibtex DOI: 10.1016/j.matpur.2010.03.002

Dustin Cartwright ; Mathias Häbich ; Bernd Sturmfels and Annette Werner: Mustafin varieties
In: Selecta mathematica, 17 (2011) 4, p. 757-793
Bibtex DOI: 10.1007/s00029-011-0075-x ARXIV: http://arxiv.org/abs/1002.1418
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Rommel V. Ceguerra ; Joseph T. Lizier and Albert Y. Zomaya: Information storage and transfer in the synchronization process in locally-connected networks
In: IEEE Symposium Series in Computational Intelligence (SSCI 2011) - IEEE Symposium on Artificial Life, Paris, France, April 11-15, 2011
Piscataway, N.J. : IEEE, 2011. - P. 54-61
Bibtex DOI: 10.1109/ALIFE.2011.5954653

D. Chakraborty ; Manuel V. Gnann ; D. Rings ; J. Glaser ; Felix Otto ; Frank Cichos and Klaus Kroy: Generalised Einstein relation for hot Brownian motion
Journal Open Access

Eleonora Cinti: Interpolation inequalities in pattern formation
In: Bruno Pini mathematical analysis seminar, 2 (2011) 1, p. 1-18
Bibtex LINK: http://mathematicalanalysis.unibo.it/article/view/2666
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Brian Clarke: The Riemannian \(L^2\) topology on the manifold of Riemannian metrics
In: Annals of global analysis and geometry, 39 (2011) 2, p. 131-163
Bibtex DOI: 10.1007/s10455-010-9227-z
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Andrea Collevecchio and Tom Schmitz: Bounds on the speed and on regeneration times for certain processes on regular trees
In: The annals of applied probability, 21 (2011) 3, p. 1073-1101
Bibtex MIS-Preprint: 33/2009 DOI: 10.1214/10-AAP719
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Jacky Cresson and Isabelle Greff: Non-differentiable embedding of Lagrangian systems and partial differential equations
In: Journal of mathematical analysis and applications, 384 (2011) 2, p. 626-646
Bibtex MIS-Preprint: 16/2010 DOI: 10.1016/j.jmaa.2011.06.008
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Wei Bing Deng ; Du Juan Wang ; Wei Li and Qiuping Alexandre Wang: English and Chinese language frequency time series analysis
In: Chinese science bulletin, 56 (2011) 34, p. 3717-3722
Bibtex DOI: 10.1007/s11434-011-4752-0
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Weibing Deng ; Wei Li ; Xu Cai and Qiuping Alexandre Wang: On the application of the cross-correlation in the Chinese fund market : descriptive properties and scaling behaviors
In: Advances in complex systems, 14 (2011) 1, p. 97-109
Bibtex MIS-Preprint: 46/2011 DOI: 10.1142/S0219525911002871
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Weibing Deng ; Wei Li ; Xu Cai and Qiuping Alexandre Wang: The exponential degree distribution in complex networks : non-equilibrium network theory, numerical simulation and empirical data
In: Physica / A, 390 (2011) 8, p. 1481-1485
Bibtex MIS-Preprint: 47/2011 DOI: 10.1016/j.physa.2010.12.029
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Weibing Deng ; Wei Li ; Xu Cai and Qiuping Alexandre Wang: Self-similarity and network perspective of the Chinese fund market
In: Physica / A, 390 (2011) 21/22, p. 3826-3834
Bibtex MIS-Preprint: 48/2011 DOI: 10.1016/j.physa.2011.06.029
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Ralf Der and Georg Martius: The playful machine : theoretical foundation and practical realization of self-organizing robots
Berlin : Springer, 2011. - XIII, 333 p.
(Cognitive systems monographs ; 15)
ISBN 978-3-642-20253-7 ISBN 978-3-642-20252-0
Bibtex DOI: 10.1007/978-3-642-20253-7

Yang Ding ; Stefan Grünewald and Peter J. Humphries: On agreement forests
In: Journal of combinatorial theory / A, 118 (2011) 7, p. 2059-2065
Bibtex DOI: 10.1016/j.jcta.2011.04.013

Patrick W. Dondl ; Luca Mugnai and Matthias Röger: Confined elastic curves
In: SIAM journal on applied mathematics, 71 (2011) 6, p. 2205-2226
Bibtex DOI: 10.1137/100805339

Florian Drechsler: Über die Lösung von elliptischen Randwertproblemen mittels Gebietszerlegungstechniken, Hierarchischer Matrizen und der Methode der finiten Elemente
Dissertation, Universität Leipzig, 2011
Bibtex LINK: http://nbn-resolving.de/urn:nbn:de:bsz:15-qucosa-68462
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Andreas W. M. Dress ; K.T. Hubert ; Jack Koolen and Vincent Moulton: Blocks and cut vertices of the Buneman graph
In: SIAM journal on discrete mathematics, 25 (2011) 4, p. 1902-1919
Bibtex DOI: 10.1137/090764360 ARXIV: https://arxiv.org/abs/1101.4927
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Andreas W. M. Dress and Wei Lin: Dynamics of a discrete-time model of an 'ideal storage' system describing hetero-catalytic processes on metal surfaces
In: International journal of bifurcation and chaos in applied sciences and engineering, 21 (2011) 5, p. 1331-1339
Bibtex DOI: 10.1142/S0218127411029197

Lukas Döring ; Felix Otto and Jutta Steiner: Domänen- und Wandmuster in ferromagnetischen Filmen
In: Jahrbuch der Max-Planck-Gesellschaft, 2011 (2011), Forschungsbericht - Max-Planck-Institut für Mathematik in den Naturwissenschaften
Bibtex LINK: http://www.mpg.de/1262200/Ferromagnetische_Filme
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Florian Eggenhofer ; Hakim Tafer ; Peter F. Stadler and Ivo L. Hofacker: RNApredator : fast accessibility-based prediction of sRNA targets
In: Nucleic acids research, 39 (2011), p. W149-W154
Bibtex DOI: 10.1093/nar/gkr467
Journal Open Access

Benjamin Eltzner and Hanno Gottschalk: Dynamical backreaction in Robertson-Walker spacetime
In: Reviews in mathematical physics, 23 (2011) 5, p. 531-551
Bibtex DOI: 10.1142/S0129055X11004357

Tobias Elze: Accurate and precise visual stimulation in neuroscience and psychophysics experiments
Dissertation, Universität Leipzig, 2011
Bibtex

Tobias Elze ; Chen Song ; Rainer Stollhoff and Jürgen Jost: Chinese characters reveal impacts of prior experience on very early stages of perception
In: BMC neuroscience, 12 (2011), 14
Bibtex MIS-Preprint: 3/2011 DOI: 10.1186/1471-2202-12-14
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Tobias Elze and T. G. Tanner: Dangerous liquids : temporal properties of modern LCD monitors and implications for vision science experiments
In: Perception, 40, suppl. (2011) ECVP abstracts, p. 175-175
Bibtex DOI: 10.1177/03010066110400S102

Özge Erdem and Bülent Karasözen: Energy preserving methods for Volterra lattice equation
In: TWMS Journal of applied and engineering mathematics, 1 (2011) 2, p. 192-202
Bibtex LINK: http://jaem.isikun.edu.tr/web/images/articles/vol.1.no.2/07.pdf
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Burak M. Erdogan ; Dirk Hundertmark and Young-Ran Lee: Exponential decay of dispersion managed solitons for vanishing average dispersion
In: Mathematical research letters, 18 (2011) 1, p. 11-24
Bibtex DOI: 10.4310/MRL.2011.v18.n1.a2 ARXIV: https://arxiv.org/abs/1009.3707
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Selim Esedoglu and Felix Otto: Threshold dynamics for arbitrary surface tensions [In: Geometric partial differential equations : theory, numerics and applications ; November 27th - December 3rd, 2011 ; report no. 54/2011]
In: Oberwolfach reports, 8 (2011) 4, p. 3138-3140
Bibtex DOI: 10.4171/OWR/2011/54 LINK: https://publications.mfo.de/handle/mfo/3269
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Mike Espig ; Wolfgang Hackbusch ; Stefan Handschuh and Reinhold Schneider: Optimization problems in contracted tensor networks
In: Computing and visualization in science, 14 (2011) 6, p. 271-285
Bibtex MIS-Preprint: 66/2011 DOI: 10.1007/s00791-012-0183-y
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Oliver Fabert and Paolo Rossi: String, dilaton, and divisor equation in symplectic field theory
In: International mathematics research notices, 2011 (2011) 19, p. 4384-4404
Bibtex MIS-Preprint: 6/2010 DOI: 10.1093/imrn/rnq251
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Mario Fasold ; David Langenberger ; Hans Binder ; Peter F. Stadler and Steve Hoffmann: DARIO : a ncRNA detection and analysis tool for next-generation sequencing experiments
In: Nucleic acids research, 39 (2011), p. W112-W117
Bibtex DOI: 10.1093/nar/gkr357
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Maxim V. Fedorov: Molecular modeling of solvent-mediated effects in physical and biophysical chemistry
In: Abstracts of papers of the American Chemical Society, 242 (2011), 12-AEI
Bibtex

Maxim V. Fedorov ; Raz N. Arif ; Andrey Frolov ; Martin Kolar ; Anastasia O. Romanova and Aleksey G. Rozhin: Salting out in organic solvents : a new route to carbon nanotube bundle engineering
In: Physical chemistry, chemical physics, 13 (2011) 27, p. 12399-12402
Bibtex DOI: 10.1039/C1CP21440C

Maxim V. Fedorov ; Andrey Frolov ; Ekaterina L. Ratkova ; David S. Palmer and Volodymyr Sergiievskyi: Efficient predictions of physchem properties of biomolecules in aqueous solutions using the reference interaction site model
In: Abstracts of papers of the American Chemical Society, 242 (2011), 47-COMP
Bibtex

Maxim V. Fedorov ; Andrey Frolov ; Anastasia O. Romanova ; Kathleen Kirchner and I. V. Terekhova: Ion effects on biomolecule conformation and complex formation in water
In: Abstracts of papers of the American Chemical Society, 241 (2011), 317-COMP
Bibtex

Maxim V. Fedorov ; Jonathan M. Goodman ; Dmitry Nerukh and Stephan Schumm: Self-assembly of trehalose molecules on a lysozyme surface : the broken glass hypothesis
In: Physical chemistry, chemical physics, 13 (2011) 6, p. 2294-2299
Bibtex DOI: 10.1039/C0CP01705A

Sven Findeiß ; Jan Engelhardt ; Sonja J. Prohaska and Peter F. Stadler: Protein-coding structured RNAs : a computational survey of conserved RNA secondary structures overlapping coding regions in drosophilids
Repository Open Access

Sven Findeiß ; David Langenberger ; Peter F. Stadler and Steve Hoffmann: Traces of post-transcriptional RNA modifications in deep sequencing data
In: Biological chemistry, 392 (2011) 4, p. 305-313
Bibtex DOI: 10.1515/BC.2011.043 LINK: http://www.bioinf.uni-leipzig.de/publications/10-036
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Robert Finn: Criteria for floating I
In: Journal of mathematical fluid mechanics, 13 (2011) 1, p. 103-115
Bibtex MIS-Preprint: 104/2007 DOI: 10.1007/s00021-009-0009-y
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Fernando Fraternali ; Thomas Blesgen ; A. Amendola and C. Daraio: Multiscale mass-spring models of carbon nanotube foams
In: Journal of the mechanics and physics of solids, 59 (2011) 1, p. 89-102
Bibtex DOI: 10.1016/j.jmps.2010.09.004

Andrey Frolov: Ion interactions with carbon nanomaterial surfaces in aqueous and non-aqueous solutions
Dissertation, Universität Duisburg-Essen, 2011
Bibtex LINK: http://duepublico.uni-duisburg-essen.de/servlets/DocumentServlet?id=26448

Andrey Frolov: Computer simulation of salt effects on nanoobjects in dispersions
In: Abstracts of papers of the American Chemical Society, 242 (2011), 13-AEI
Bibtex

Andrey Frolov ; Raz N. Arif ; Anastasia O. Romanova ; Aleksey G. Rozhin and Maxim V. Fedorov: Effects of salts on carbon nanotubes dispersions : understanding molecular mechanisms
In: Abstracts of papers of the American Chemical Society, 242 (2011), 245-COLL
Bibtex

Andrey Frolov ; Tom Kirchner ; Kathleen Kirchner and Maxim V. Fedorov: Interactions of ionic liquids and their mixtures with carbon nanomaterials : insights from molecular modeling
In: Abstracts of papers of the American Chemical Society, 242 (2011), 345-COLL
Bibtex

Andrey Frolov ; Ekaterina L. Ratkova ; David S. Palmer and Maxim V. Fedorov: Hydration thermodynamics using the reference interaction site model : speed or accuracy?
In: The journal of physical chemistry / B, 115 (2011) 19, p. 6011-6022
Bibtex DOI: 10.1021/jp111271c

Andrey Frolov ; Aleksey G. Rozhin and Maxim V. Fedorov: Ion interactions with the carbon nanotube surface in aqueous solutions
In: Abstracts of papers of the American Chemical Society, 241 (2011), 178-COMP
Bibtex

Ryoki Fukushima: Second order asymptotics for Brownian motion in a heavy tailed Poissonian potential
In: Markov processes and related fields, 17 (2011) 3, p. 447-482
Bibtex ARXIV: https://arxiv.org/abs/1010.3875 LINK: http://math-mprf.org/journal/articles/id1248/
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Ivan P. Gavrilyuk and Boris N. Khoromskij: Quantized-TT-Cayley transform to compute dynamics and spectrum of high-dimensional Hamiltonians
In: Computational methods in applied mathematics, 11 (2011) 3, p. 273-290
Bibtex MIS-Preprint: 43/2011 DOI: 10.2478/cmam-2011-0015
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Ivan P. Gavrilyuk ; Boris N. Khoromskij and Eugene E. Tyrtyshnikov: Preface to the special issue, CMAM 2011, no. 3.
In: Computational methods in applied mathematics, 11 (2011) 3, p. 272-272
Bibtex DOI: 10.2478/cmam-2011-0014

Antoine Gloria and Stefan Neukamm: Commutability of homogenization and linearization at identity in finite elasticity and applications
In: Annales de l'Institut Henri Poincaré / C, 28 (2011) 6, p. 941-964
Bibtex MIS-Preprint: 73/2010 DOI: 10.1016/j.anihpc.2011.07.002
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Antoine Gloria and Felix Otto: An optimal variance estimate in stochastic homogenization of discrete elliptic equations
In: The annals of probability, 39 (2011) 3, p. 779-856
Bibtex DOI: 10.1214/10-AOP571 ARXIV: https://arxiv.org/abs/1104.1291
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Alireza Goudarzi ; Christof Teuscher ; Natali Gulbahce and Thimo Rohlf: Emergent criticality through adaptive information processing in Boolean networks
In: Physical review letters, 108 (2011) 12, 128702
Bibtex MIS-Preprint: 17/2011 DOI: 10.1103/PhysRevLett.108.128702 ARXIV: https://arxiv.org/abs/1104.4141
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Lars Grasedyck and Wolfgang Hackbusch: An introduction to hierarchical (\(\mathscr {H}\)-) rank and TT-rank of tensors with examples
In: Computational methods in applied mathematics, 11 (2011) 3, p. 291-304
Bibtex DOI: 10.2478/cmam-2011-0016
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Nadine Grosse: The Hijazi inequality on conformally parabolic manifolds
In: Differential geometry and its applications, 29 (2011) 6, p. 838-849
Bibtex MIS-Preprint: 43/2008 DOI: 10.1016/j.difgeo.2011.08.011
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Jiao Gu ; Zong Mao Gao and Wei Li: Modeling of epidemic spreading with white Gaussian noise
In: Chinese science bulletin, 56 (2011) 34, p. 3683-3688
Bibtex DOI: 10.1007/s11434-011-4753-z
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Partha Guha and Anindya Ghose Choudhury: Hamiltonization of higher-order nonlinear ordinary differential equations and the Jacobi last multiplier
In: Acta applicandae mathematicae, 116 (2011) 2, p. 179-197
Bibtex DOI: 10.1007/s10440-011-9637-3

Wolfgang Hackbusch: Tensorisation of vectors and their efficient convolution
In: Numerische Mathematik, 119 (2011) 3, p. 465-488
Bibtex MIS-Preprint: 48/2010 DOI: 10.1007/s00211-011-0393-0
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Wolfgang Hackbusch: Numerical tensor calculus [In: Mathematical methods in quantum chemistry ; June 26th - July 2nd, 2011 ; report no. 32/2011]
In: Oberwolfach reports, 8 (2011) 2, p. 1798-1800
Bibtex DOI: 10.4171/OWR/2011/32 LINK: https://publications.mfo.de/handle/mfo/3247
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Wolfgang Hackbusch: Convolution of \(\mathbb{R^n}\)-vectors in \(O(log(n))\) [In: Schnelle Löser für partielle Differentialgleichungen = Fast solvers for partial differential equations ; May 22nd - 28th, 2011 ; report no. 28/2011]
In: Oberwolfach reports, 8 (2011) 2, p. 1556-1557
Bibtex DOI: 10.4171/OWR/2011/28 LINK: https://publications.mfo.de/handle/mfo/3243
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Piotr M. Hajac ; Ulrich Kräehmer ; Rainer Matthes and Bartosz Zielinski: Piecewise principal comodule algebras
In: Journal of noncommutative geometry, 5 (2011) 4, p. 591-614
Bibtex DOI: 10.4171/JNCG/88 ARXIV: https://arxiv.org/abs/0707.1344
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I. Harsanyi ; Philippe Anthony Bopp ; A. Vrhovsek and L. Pusztai: On the hydration structure of LiCl aqueous solutions : a Reverse Monte Carlo based combination of diffraction data and Molecular Dynamics simulations
In: Journal of molecular liquids, 158 (2011) 1, p. 61-67
Bibtex DOI: 10.1016/j.molliq.2010.10.010

Marc Hellmuth: A local prime factor decomposition algorithm
In: Discrete mathematics, 311 (2011) 12, p. 944-965
Bibtex DOI: 10.1016/j.disc.2011.02.016

Michael Holst ; Jeffrey S. Ovall and Ryan Szypowski: An efficient, reliable and robust error estimator for elliptic problems in \(\mathbb{R}^3\)
In: Applied numerical mathematics, 61 (2011) 5, p. 675-695
Bibtex MIS-Preprint: 38/2010 DOI: 10.1016/j.apnum.2011.01.002
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Peter Hornung: Approximation of flat \(W^{2,2}\) isometric immersions by smooth ones
In: Archive for rational mechanics and analysis, 199 (2011) 3, p. 1015-1067
Bibtex MIS-Preprint: 78/2007 DOI: 10.1007/s00205-010-0374-y
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Peter Hornung: Invertibility and non-invertibility in thin elastic structures
In: Archive for rational mechanics and analysis, 199 (2011) 2, p. 353-368
Bibtex MIS-Preprint: 62/2006 DOI: 10.1007/s00205-010-0391-x
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Peter Hornung: Fine level set structure of flat isometric immersions
In: Archive for rational mechanics and analysis, 199 (2011) 3, p. 943-1014
Bibtex DOI: 10.1007/s00205-010-0375-x

Peter Hornung: Euler-Lagrange equation and regularity for flat minimizers of the Willmore functional
In: Communications on pure and applied mathematics, 64 (2011) 3, p. 367-441
Bibtex DOI: 10.1002/cpa.20342

Alexander Huber: The divergence equation in weighted- and \(L^{p(\cdot)}\)-spaces
In: Mathematische Zeitschrift, 267 (2011) 1-2, p. 341-366
Bibtex DOI: 10.1007/s00209-009-0622-8
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Alexander Huber: Periodic solutions for the Landau-Lifshitz-Gilbert equation
In: Journal of differential equations, 250 (2011) 5, p. 2462-2484
Bibtex DOI: 10.1016/j.jde.2010.11.019 ARXIV: http://arxiv.org/abs/1006.4765
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Hyung Ju Hwang ; Alan D. Rendall and Juan J. L. Velázquez: Optimal gradient estimates and asymptotic behaviour for the Vlasov-Poisson system with small initial data
In: Archive for rational mechanics and analysis, 200 (2011) 1, p. 313-360
Bibtex MIS-Preprint: 9/2007 DOI: 10.1007/s00205-011-0405-3 ARXIV: http://arxiv.org/abs/math/0606389
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A. Idrissi ; Ivan Vyalov ; Michael G. Kiselev ; Maxim V. Fedorov and P. Jedlovszky: Heterogeneity of the local structure in sub- and supercritical ammonia : a Voronoi polyhedra analysis
In: The journal of physical chemistry / B, 115 (2011) 31, p. 9646-9652
Bibtex DOI: 10.1021/jp204078u

Radu Ignat and Felix Otto: A compactness result for Landau state in thin-film micromagnetics
In: Annales de l'Institut Henri Poincaré / C, 28 (2011) 2, p. 247-282
Bibtex MIS-Preprint: 52/2010 DOI: 10.1016/j.anihpc.2011.01.001 ARXIV: https://arxiv.org/abs/1009.1649
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Sebastian Jachalski ; Robert Huth ; Georgy Kitavtsev ; Dirk Peschka and Barbara Wagner: Stationary solutions for two-layer lubrication equations
In: Preprint / Weierstrass-Institut für Angewandte Analysis und Stochastik, 1670 (2011), p. 1-25
Bibtex LINK: http://www.wias-berlin.de/preprint/1670/wias_preprints_1670.pdf
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Ole Johannsen: Robuste Präkonditionierung von \(\mathscr {H}\)-Matrizen
Diplomarbeit, Universität Leipzig, 2011
Bibtex

Jürgen Jost: Riemannian geometry and geometric analysis
6. edition. - Berlin [u. a.] : Springer, 2011. - XIII, 611 p.
ISBN 978-3-642-21297-0 ISBN 978-3-642-21298-7
Bibtex DOI: 10.1007/978-3-642-21298-7

Jürgen Jost ; Xianqing Li-Jost ; Qiaoling Wang and Changyu Xia: Universal bounds for eigenvalues of the polyharmonic operators
In: Transactions of the American Mathematical Society, 363 (2011) 4, p. 1821-1854
Bibtex DOI: 10.1090/S0002-9947-2010-05147-5 ARXIV: https://arxiv.org/abs/0910.2067
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Jürgen Jost and Fatma Muazzez Simsir: Non-divergence harmonic maps
In: Harmonic maps and differential geometry / E. Loubeau... (eds.)
Providence, RI : American Mathematical Society, 2011. - P. 231-238
Bibtex

Stephanie Kehr ; Sebastian Bartschat ; Peter F. Stadler and Hakim Tafer: PLEXY : efficient target prediction for box C/D snoRNAs
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Kerry Key and Jeffrey S. Ovall: A parallel goal-oriented adaptive finite element method for 2.5-D electromagnetic modeling
In: Geophysical journal international, 186 (2011) 1, p. 137-154
Bibtex MIS-Preprint: 40/2010 DOI: 10.1111/j.1365-246X.2011.05025.x
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Venera Khoromskaia ; Boris N. Khoromskij and Reinhold Schneider: QTT representation of the Hartree and exchange operators in electronic structure calculations
In: Computational methods in applied mathematics, 11 (2011) 3, p. 327-341
Bibtex MIS-Preprint: 37/2011 DOI: 10.2478/cmam-2011-0018
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Boris N. Khoromskij: \(O(d \log N) \)-quantics approximation of \(N\)-\(d\) tensors in high-dimensional numerical modeling
In: Constructive approximation, 34 (2011) 2, p. 257-280
Bibtex MIS-Preprint: 55/2009 DOI: 10.1007/s00365-011-9131-1
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Boris N. Khoromskij: Quantized TT approximation for fast solution of high-dimensional PDEs [In: Schnelle Löser für partielle Differentialgleichungen = Fast solvers for partial differential equations ; May 22nd - 28th, 2011 ; report no. 28/2011]
In: Oberwolfach reports, 8 (2011) 2, p. 1555-1556
Bibtex DOI: 10.4171/OWR/2011/28 LINK: https://publications.mfo.de/handle/mfo/3243
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Boris N. Khoromskij ; Venera Khoromskaia and Heinz-Jürgen Flad: Numerical solution of the Hartree-Fock equation in multilevel tensor-structured format
In: SIAM journal on scientific computing, 33 (2011) 1, p. 45-65
Bibtex MIS-Preprint: 44/2009 DOI: 10.1137/090777372
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Boris N. Khoromskij and Ivan V. Oseledets: QTT approximation of elliptic solution operators in higher dimensions
In: Russian journal of numerical analysis and mathematical modelling, 26 (2011) 3, p. 303-322
Bibtex MIS-Preprint: 79/2009 DOI: 10.1515/RJNAMM.2011.017
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Boris N. Khoromskij ; Stefan A. Sauter and Alexander Veit: Fast quadrature techniques for retarded potentials based on TT/QTT tensor approximation
In: Computational methods in applied mathematics, 11 (2011) 3, p. 342-362
Bibtex MIS-Preprint: 42/2011 DOI: 10.2478/cmam-2011-0019
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Boris N. Khoromskij and Christoph Schwab: Tensor-structured Galerkin approximation of parametric and stochastic elliptic PDEs
In: SIAM journal on scientific computing, 33 (2011) 1, p. 364-385
Bibtex MIS-Preprint: 9/2010 DOI: 10.1137/100785715
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Georgy Kitavtsev ; Philippe Laurencot and Barbara Niethammer: Weak solutions to lubrication equations in the presence of strong slippage
In: Methods and applications of analysis, 18 (2011) 2, p. 183-202
Bibtex MIS-Preprint: 66/2010 DOI: 10.4310/MAA.2011.v18.n2.a4 ARXIV: https://arxiv.org/abs/1012.0687
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Georgy Kitavtsev ; L. Recke and Barbara Wagner: Centre manifold reduction approach for the lubrication equation
In: Nonlinearity, 24 (2011) 8, p. 2347-2369
Bibtex DOI: 10.1088/0951-7715/24/8/010

Kiran Murlidhar Kolwankar ; Quansheng Ren ; Areejit Samal and Jürgen Jost: Learning and structure of neuronal networks
In: Pramana, 77 (2011) 5, Special issue, p. 817-826
Bibtex DOI: 10.1007/s12043-011-0192-2

S. Kondrat ; Nikolaj Georgi ; Maxim V. Fedorov and Alexei A. Kornyshev: A superionic state in nano-porous double-layer capacitors : insights from Monte Carlo simulations
In: Physical chemistry, chemical physics, 13 (2011) 23, p. 11359-11366
Bibtex DOI: 10.1039/C1CP20798A

S. Kondrat and Alexei A. Kornyshev: Superionic state in double-layer capacitors with nanoporous electrodes
In: Journal of physics / Condensed matter, 23 (2011) 2, 022201
Bibtex DOI: 10.1088/0953-8984/23/2/022201
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Ilona Kosiuk and Peter Szmolyan: Scaling in singular perturbation problems : blowing-up a relaxation oscillator
In: SIAM journal on applied dynamical systems, 10 (2011) 4, p. 1307-1343
Bibtex MIS-Preprint: 50/2009 DOI: 10.1137/100814470
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David C. Krakauer ; James P. Collins ; Douglas Erwin ; Jessica C. Flack ; Walter Fontana ; Manfred D. Laubichler ; Sonja J. Prohaska ; Geoffrey B. West and Peter F. Stadler: The challenges and scope of theoretical biology
In: Journal of theoretical biology, 276 (2011) 1, p. 269-276
Bibtex DOI: 10.1016/j.jtbi.2011.01.051

David Langenberger ; Sebastian Bartschat ; Jana Hertel ; Steve Hoffmann ; Hakim Tafer and Peter F. Stadler: MicroRNA or Not MicroRNA?
In: Advances in bioinformatics and computational biology : 6th Brazilian Symposium on Bioinformatics, BSB 2011, Brasilia, Brazil, August 10-12, 2011 ; proceedings / Osmar Norberto de Souza... (eds.)
Berlin [u. a.] : Springer, 2011. - P. 1-9
(Lecture notes in computer science ; 6832)
Bibtex DOI: 10.1007/978-3-642-22825-4_1

Markus Lechner ; Sven Findeiß ; Lydia Steiner ; Manja Marz ; Peter F. Stadler and Sonja J. Prohaska: Proteinortho : detection of (Co-)orthologs in large-scale analysis
Journal Open Access

Jihoon Lee ; Paul F. X. Müller and Stefan Müller: Compensated compactness, separately convex functions and interpolatory estimates between Riesz transforms and Haar projections
In: Communications in partial differential equations, 36 (2011) 4, p. 547-601
Bibtex MIS-Preprint: 7/2008 DOI: 10.1080/03605301003793382 ARXIV: http://arxiv.org/abs/0902.2102
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Marta Lewicka and Stefan Müller: The uniform Korn-Poincaré inequality in thin domains
In: Annales de l'Institut Henri Poincaré / C, 28 (2011) 3, p. 443-469
Bibtex MIS-Preprint: 102/2007 DOI: 10.1016/j.anihpc.2011.03.003
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Andrew X. Li ; Manja Marz ; Jing Qin and Christian M. Reidys: RNA-RNA interaction prediction based on multiple sequence alignments
In: Bioinformatics, 27 (2011) 4, p. 456-463
Bibtex DOI: 10.1093/bioinformatics/btq659 ARXIV: https://arxiv.org/abs/1003.3987
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Bo Li ; Zhi-Xi Wang and Shao-Ming Fei: Quantum discord and geometry for a class of two-qubit states
In: Physical review / A, 83 (2011) 2, 022321
Bibtex MIS-Preprint: 4/2011 DOI: 10.1103/PhysRevA.83.022321
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Ming Li ; Shao-Ming Fei and Xianqing Li-Jost: Bipartite Bell inequality and maximal violation
In: Communications in theoretical physics, 55 (2011) 3, p. 418-420
Bibtex MIS-Preprint: 15/2010 DOI: 10.1088/0253-6102/55/3/09
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Ming Li ; Shao-Ming Fei and Xianqing Li-Jost: Bell inequality, separability and entanglement distillation
In: Chinese science bulletin, 56 (2011) 10, p. 945-954
Bibtex MIS-Preprint: 1/2011 DOI: 10.1007/s11434-011-4395-1
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Wei Li ; Zong-Mao Gao and Jiao Gu: Effects of variant rates and noise on epidemic spreading
In: Chinese physics letters, 28 (2011) 5, 058903
Bibtex DOI: 10.1088/0256-307X/28/5/058903

Wei Li ; Yang Luo ; Yuan Fang Wang and Ai Ping Cai: A mean-field Bak-Sneppen model with varying interaction strength
In: Chinese science bulletin, 56 (2011) 34, p. 3639-3642
Bibtex DOI: 10.1007/s11434-011-4654-1
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Xiao-Sheng Li ; Xiu-Hong Gao and Shao-Ming Fei: Lower bound of concurrence based on positive maps
In: Physical review / A, 83 (2011) 3, p. 034303-034303
Bibtex MIS-Preprint: 57/2011 DOI: 10.1103/PhysRevA.83.034303
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Joseph T. Lizier ; Jakob Heinzle ; Annette Horstmann ; John-Dylan Haynes and Mikhail Prokopenko: Multivariate information-theoretic measures reveal directed information structure and task relevant changes in fMRI connectivity
In: Journal of computational neuroscience, 30 (2011) 1, p. 85-107
Bibtex DOI: 10.1007/s10827-010-0271-2

Joseph T. Lizier ; Jakob Heinzle ; Chun S. Soon ; John-Dylan Haynes and Mikhail Prokopenko: Spatiotemporal information transfer pattern differences in motor selection
In: Twentieth Annual Computational Neuroscience Meeting : CNS*2011 ; Stockholm, Schweden, 23-28 July 2011 / Jean-Marc Fellous... (eds.)
London : BioMed Central, 2011
(BMC neuroscience ; 12 ; Supplement 1)
Bibtex DOI: 10.1186/1471-2202-12-S1-P261

Joseph T. Lizier ; Siddharth Pritam and Mikhail Prokopenko: Information dynamics in small-world boolean networks
In: Artificial life, 17 (2011) 4, p. 293-314
Bibtex DOI: 10.1162/artl_a_00040

Joseph T. Lizier ; Siddharth Pritam and Mikhail Prokopenko: Computational capabilities of small-world Boolean networks
In: Advances in Artificial Life, ECAL 2011 : Proceedings of the Eleventh European Conference on the Synthesis and Simulation of Living Systems / Tom Lenarts (ed.)
Cambridge, MA : MIT Press, 2011. - P. 463-464
Bibtex LINK: http://mitpress.mit.edu/books/chapters/0262297140chap71.pdf

Ronny Lorenz ; Stephan H. Bernhart ; Christian Höner zu Siederdissen ; Hakim Tafer ; Christoph Flamm ; Peter F. Stadler and Ivo L. Hofacker: ViennaRNA Package 2.0
In: Algorithms for molecular biology, 6 (2011), 26
Bibtex DOI: 10.1186/1748-7188-6-26
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Irma Lozada-Chávez ; Peter F. Stadler and Sonja J. Prohaska: 'Hypothesis for the modern RNA world' : a pervasive non-coding RNA-based genetic regulation is a prerequisite for the emergence of multicellular complexity
In: Origins of life and evolution of the biosphere, 41 (2011) 6, p. 587-607
Bibtex DOI: 10.1007/s11084-011-9262-1

Wenlian Lu ; Fatihcan M. Atay and Jürgen Jost: Consensus and synchronization in discrete-time networks of multi-agents with stochastically switching topologies and time delays
In: Networks and heterogeneous media, 6 (2011) 2, p. 329-349
Bibtex MIS-Preprint: 30/2011 DOI: 10.3934/nhm.2011.6.329 ARXIV: https://arxiv.org/abs/0912.2425
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Wenlian Lu ; Fatihcan M. Atay and Jürgen Jost: Consensus and synchronization in delayed networks of mobile multi-agents
In: Proceedings of the 18th IFAC world congress, 2011
Milano : International Federation of Automatic Control, 2011. - P. 2362-2367
Bibtex DOI: 10.3182/20110828-6-IT-1002.00882

Hongjun Luo: Complete optimisation of multi-configuration Jastrow wave functions by variational transcorrelated method
In: The journal of chemical physics, 135 (2011) 2, 024109
Bibtex DOI: 10.1063/1.3607990

Percy D. Makita: Periodic and homoclinic travelling waves in infinite lattices
In: Nonlinear analysis / A, 74 (2011) 6, p. 2071-2086
Bibtex MIS-Preprint: 36/2009 DOI: 10.1016/j.na.2010.11.011
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Robert Manning ; Steven Collicott and Robert Finn: Occlusion criteria in tubes under transverse body forces
In: Journal of fluid mechanics, 682 (2011), p. 397-414
Bibtex MIS-Preprint: 72/2010 DOI: 10.1017/jfm.2011.230
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Kishore B. Marathe: Geometric topology and field theory on 3-manifolds
In: The mathematics of knots : theory and application / Markus Banagl... (eds.)
Heidelberg [u.a.] : Springer, 2011. - P. 199-256
(Contributions in mathematical and computational sciences ; 1)
Bibtex MIS-Preprint: 45/2009 DOI: 10.1007/978-3-642-15637-3_8
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Georg Martius and J. Michael Herrmann: Tipping the scales : guidance and intrinsically motivated behavior
In: Advances in Artificial Life, ECAL 2011 : Proceedings of the Eleventh European Conference on the Synthesis and Simulation of Living Systems / Tom Lenarts (ed.)
Cambridge, MA : MIT Press, 2011. - P. 506-513
Bibtex

Manja Marz ; Andreas R. Gruber ; Christian Höner zu Siederdissen ; Fabian Amman ; Stefan Badelt ; Sebastian Bartschat ; Stephan H. Bernhart ; Wolfgang Beyer ; Stephanie Kehr ; Ronny Lorenz ; Andrea Tanzer ; Dilmurat Yusuf ; Hakim Tafer ; Ivo L. Hofacker and Peter F. Stadler: Animal snoRNAs and scaRNAs with exceptional structures
In: RNA biology, 8 (2011) 6, p. 938-946
Bibtex DOI: 10.4161/rna.8.6.16603
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Cristina Masoller and Fatihcan M. Atay: Complex transitions to synchronization in delay-coupled networks of logistic maps
In: The European physical journal / D, 62 (2011) 1, p. 119-126
Bibtex MIS-Preprint: 31/2011 DOI: 10.1140/epjd/e2011-10370-7
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František Matúš and Johannes Rauh: Maximization of the information divergence from an exponential family and criticality
In: IEEE international symposium on information theory proceedings (ISIT) 2011 : July 31-August 5, 2011 in St. Petersburg, Russia
Piscataway, NY : IEEE, 2011. - P. 903-907
Bibtex DOI: 10.1109/ISIT.2011.6034269

Georg Menz: LSI for Kawasaki dynamics with weak interaction
In: Communications in mathematical physics, 307 (2011) 3, p. 817-860
Bibtex MIS-Preprint: 31/2010 DOI: 10.1007/s00220-011-1326-6
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Georg Menz: Equilibrium dynamics of continuous unbounded spin systems
Dissertation, Rheinische Friedrich-Wilhelms-Universität Bonn, 2011
Bibtex LINK: http://hss.ulb.uni-bonn.de/2011/2533/2533.htm
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Peter Menzel ; Peter F. Stadler and Jan Gorodkin: maxAlike : maximum likelihood-based sequence reconstruction with application to improved primer design for unknown sequences
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Alexander Mielke ; Felix Otto ; Giuseppe Savaré and Ulisse Stefanelli: Variational methods for evolution ; December 4th - December 10th, 2011 ; report no. 55/2011
In: Oberwolfach reports, 8 (2011) 4, p. 3145-3216
Bibtex DOI: 10.4171/OWR/2011/55 LINK: https://publications.mfo.de/handle/mfo/3270
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Guido Montúfar and Nihat Ay: Refinements of universal approximation results for deep belief networks and restricted Boltzmann machines
In: Neural computation, 23 (2011) 5, p. 1306-1319
Bibtex MIS-Preprint: 23/2010 DOI: 10.1162/NECO_a_00113 ARXIV: https://arxiv.org/abs/1005.1593
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Guido Montúfar ; Johannes Rauh and Nihat Ay: Expressive power and approximation errors of restricted Boltzmann machines
In: Advances in neural information processing systems 24 : NIPS 2011 ; 25th annual conference on neural information processing systems 2011, Granada, Spain December 12th - 15th / John Shawe-Taylor (ed.)
La Jolla, CA : Neural Information Processing Systems, 2011. - P. 415-423
Bibtex MIS-Preprint: 27/2011 ARXIV: https://arxiv.org/abs/1406.3140 LINK: http://papers.nips.cc/paper/4380-expressive-power-and-approximation-errors-of-restricted-boltzmann-machines.pdf
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Alexandra Monzner and Frol Zapolsky: A comparison of symplectic homogenization and Calabi quasi-states
In: Journal of topology and analysis, 3 (2011) 3, p. 243-263
Bibtex MIS-Preprint: 50/2010 DOI: 10.1142/S1793525311000581 ARXIV: https://arxiv.org/abs/1008.2449
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Luca Mugnai and Matthias Röger: Convergence of perturbed Allen-Cahn equations to forced mean curvature flow
In: Indiana University mathematics journal, 60 (2011) 1, p. 41-75
Bibtex MIS-Preprint: 13/2009 DOI: 10.1512/iumj.2011.60.3949
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Chiranjib Mukherjee: Large deviations for Brownian intersection measures
Dissertation, Universität Leipzig, 2011
Bibtex LINK: http://nbn-resolving.de/urn:nbn:de:bsz:15-qucosa-74762
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Stefan Müller and Stefan Neukamm: On the commutability of homogenization and linearization in finite elasticity
In: Archive for rational mechanics and analysis, 201 (2011) 2, p. 465-500
Bibtex DOI: 10.1007/s00205-011-0438-7

Kishore Kumar Naraparaju and Jan Schneider: Generalized cross approximation for 3d-tensors
In: Computing and visualization in science, 14 (2011) 3, p. 105-115
Bibtex MIS-Preprint: 29/2010 DOI: 10.1007/s00791-011-0166-4
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Jan Nitzschmann: Effiziente, approximative Berechnung des Spektrums von Graphen mittels hierarchischer Matrizen
Diplomarbeit, Universität Leipzig, 2011
Bibtex

Evgeny A. Nogovitsyn and Yurij A. Budkov: Development of the theory of a self-consistent field for polyelectrolyte solutions
In: Russian journal of physical chemistry / A, 85 (2011) 8, p. 1363-1368
Bibtex DOI: 10.1134/S0036024411080255

Vic Norris ; Abdallah Zemirline ; Patrick Amar ; Jean Nicolas Audinot ; Pascal Ballet ; Eshel Ben-Jacob ; Gilles Bernot ; Guillaume Beslon ; Armelle Cabin ; Eric Fanchon ; Jean-Louis Giavitto ; Nicolas Glade ; Patrick Greussay ; Yohann Grondin ; James A. Foster ; Guillaume Hutzler ; Jürgen Jost ; Francois Kepes ; Olivier Michel ; Franck Molina ; Jacqueline Signorini ; Pasquale Stano and Alain R. Thierry: Computing with bacterial constituents, cells and populations : from bioputing to bactoputing
In: Theory in biosciences, 130 (2011) 3, p. 211-228
Bibtex DOI: 10.1007/s12064-010-0118-4
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Michael Nussbaum and Arleta Szkoła: Asymptotically optimal discrimination between pure quantum states
In: Theory of quantum computation, communication, and cryptography : 5th conference, TQC 2010, Leeds, UK, April 13 - 15, 2010, revised selected papers / Wim van Dam... (eds.)
Berlin [u. a.] : Springer, 2011. - P. 1-8
(Lecture notes in computer science ; 6519)
Bibtex MIS-Preprint: 1/2010 DOI: 10.1007/978-3-642-18073-6_1 LINK: http://www.math.cornell.edu/~nussbaum/papers/10-3.pdf
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Michael Nussbaum and Arleta Szkoła: An asymptotic error bound for testing multiple quantum hypotheses
In: The annals of statistics, 39 (2011) 6, p. 3211-3233
Bibtex MIS-Preprint: 54/2011 DOI: 10.1214/11-AOS933 ARXIV: http://arxiv.org/abs/1112.1529
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Eckehard Olbrich ; Peter Achermann and Thomas Wennekers: The sleeping brain as a complex system
In: Philosophical transactions of the Royal Society / A, 369 (2011) 1952, p. 3697-3707
Bibtex DOI: 10.1098/rsta.2011.0199

Eckehard Olbrich ; Jens Christian Claussen and Peter Achermann: The multiple time scales of sleep dynamics as a challenge for modelling the sleeping brain
In: Philosophical transactions of the Royal Society / A, 369 (2011) 1952, p. 3884-3901
Bibtex DOI: 10.1098/rsta.2011.0082

Ivan V. Oseledets: Tensor-train decomposition
In: SIAM journal on scientific computing, 33 (2011) 5, p. 2295-2317
Bibtex DOI: 10.1137/090752286

Ivan V. Oseledets: DMRG approach to fast linear algebra in the TT-format
In: Computational methods in applied mathematics, 11 (2011) 3, p. 382-393
Bibtex DOI: 10.2478/cmam-2011-0021
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Ivan V. Oseledets and Eugene E. Tyrtyshnikov: Algebraic wavelet transform via quantics tensor train decomposition
In: SIAM journal on scientific computing, 33 (2011) 3, p. 1315-1328
Bibtex DOI: 10.1137/100811647
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Ivan V. Oseledets ; Eugene E. Tyrtyshnikov and N. L. Zamarashkin: Tensor-train ranks for matrices and their inverses
In: Computational methods in applied mathematics, 11 (2011) 3, p. 394-403
Bibtex DOI: 10.2478/cmam-2011-0022
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Christian Otto ; Steve Hoffmann ; Jan Gorodkin and Peter F. Stadler: Fast local fragment chaining using sum-of-pair gap costs
In: Algorithms for molecular biology, 6 (2011), 4
Bibtex DOI: 10.1186/1748-7188-6-4 LINK: http://www.bioinf.uni-leipzig.de/publications/10-039
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Felix Otto: Eine Fields-Medaille für Cedric Villani
In: Mitteilungen der Deutschen Mathematiker-Vereinigung, 19 (2011) 1, p. 24-26
Bibtex DOI: 10.1515/dmvm-2011-0013 LINK: http://page.math.tu-berlin.de/~mdmv/archive/19/mdmv-19-1-024.pdf
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Felix Otto and Christian Seis: Rayleigh-Bénard convection : improved bounds on the Nusselt number
In: Journal of mathematical physics, 52 (2011) 8, 083702
Bibtex MIS-Preprint: 6/2011 DOI: 10.1063/1.3623417
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Wolfgang Otto: Transcriptional regulatory elements : detection and evolutionary analysis
Dissertation, Universität Leipzig, 2011
Bibtex LINK: http://nbn-resolving.de/urn:nbn:de:bsz:15-qucosa-78960
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Wolfgang Otto ; Peter F. Stadler and Sonja J. Prohaska: Phylogenetic footprinting and consistent sets of local aligments
In: Combinatorial pattern matching : 22nd annual symposium, CPM 2011, Palermo, Italy, June 27-29, 2011. proceedings. / Raffaele Giancarlo... (eds.)
Berlin : Springer, 2011. - P. 118-131
(Lecture notes in computer science ; 6661)
Bibtex DOI: 10.1007/978-3-642-21458-5_12

David S. Palmer ; Gennady N. Chuev ; Ekaterina L. Ratkova and Maxim V. Fedorov: In silico screening of bioactive and biomimetic solutes using integral equations theory
In: Current pharmaceutical design, 17 (2011) 17, p. 1695-1708
Bibtex DOI: 10.2174/138161211796355065

David S. Palmer ; Andrey Frolov ; Ekaterina L. Ratkova and Maxim V. Fedorov: Toward a universal model to calculate the solvation thermodynamics of druglike molecules : the importance of new experimental databases
In: Molecular pharmaceutics, 8 (2011) 4, p. 1423-1429
Bibtex DOI: 10.1021/mp200119r

David S. Palmer ; Ekaterina L. Ratkova ; Andrey Frolov ; Volodymyr Sergiievskyi and Maxim V. Fedorov: Accurate calculation of the hydration free energies of biologically active molecules using the reference interaction site model
In: Abstracts of papers of the American Chemical Society, 241 (2011), 100-COMP
Bibtex

Arli Aditya Parikesit ; Peter F. Stadler and Sonja J. Prohaska: Evolution and quantitative comparison of genome-wide protein domain distributions
In: Genes, 2 (2011) 4, p. 912-924
Bibtex DOI: 10.3390/genes2040912
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Marleen Perseke ; Jörg Hetmank ; Matthias Bernt ; Peter F. Stadler ; Martin Schlegel and Detlef Bernhard: The enigmatic mitochondrial genome of Rhabdopleura compacta (Pterobranchia) reveals insights into selection of an efficient tRNA system and supports monophyly of Ambulacraria
In: BMC evolutionary biology, 11 (2011), 134
Bibtex DOI: 10.1186/1471-2148-11-134
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Deepak Perumal ; Areejit Samal ; Kishore R. Sakharkar and Meena K. Sakharkar: Targeting multiple targets in Pseudomonas aeruginosa PAO1 using flux balance analysis of a reconstructed genome-scale metabolic network
In: Journal of drug targeting, 19 (2011) 1, p. 1-13
Bibtex DOI: 10.3109/10611861003649753

Daniel Plaumann ; Bernd Sturmfels and Cynthia Vinzant: Quartic curves and their bitangents
In: Journal of symbolic computation, 46 (2011) 6, p. 712-733
Bibtex DOI: 10.1016/j.jsc.2011.01.007 ARXIV: http://arxiv.org/abs/1008.4104
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Mikhail Prokopenko ; Joseph T. Lizier ; Oliver Obst and X. Rosalind Wang: Relating Fisher information to order parameters
In: Physical review / E, 84 (2011) 4, 041116
Bibtex DOI: 10.1103/PhysRevE.84.041116

Jeremy D. Raincrow ; Ken Dewar ; Claudia Stocsits ; Sonja J. Prohaska ; Chris T. Amemiya ; Peter F. Stadler and Chi-hua Chiu: Hox clusters of the bichir (Actinopterygii, Polypterus senegalus) highlight unique patterns of sequence evolution in Gnathostome phylogeny
In: Journal of experimental zoology / B, 316 (2011) 6, p. 451-464
Bibtex DOI: 10.1002/jez.b.21420 LINK: http://www.bioinf.uni-leipzig.de/publications/09-040
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Kristian Ranestad and Bernd Sturmfels: The convex hull of a variety
In: Notions of positivity and the geometry of polynomials / Petter Brändén... (eds.)
Basel : Birkhäuser, 2011. - P. 331-344
(Trends in mathematics)
Bibtex DOI: 10.1007/978-3-0348-0142-3_18 ARXIV: http://arxiv.org/abs/1004.3018
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Ekaterina L. Ratkova: Computational prediction of thermodynamic properties of organic molecules in aqueous solutions
Dissertation, Universität Duisburg-Essen, 2011
Bibtex LINK: http://duepublico.uni-duisburg-essen.de/servlets/DocumentServlet?id=26404

Ekaterina L. Ratkova and Maxim V. Fedorov: Combination of RISM and cheminformatics for efficient predictions of hydration free energy of polyfragment molecules : application to a set of organic pollutants
In: Journal of chemical theory and computation, 7 (2011) 5, p. 1450-1457
Bibtex DOI: 10.1021/ct100654h

Ekaterina L. Ratkova and Maxim V. Fedorov: On a relationship between molecular polarizability and partial molar volume in water
In: The journal of chemical physics, 135 (2011) 24, 244109
Bibtex DOI: 10.1063/1.3672094

Ekaterina L. Ratkova ; Volodymyr Sergiievskyi ; Gennady N. Chuev and Maxim V. Fedorov: Reference interaction site model with structural descriptors correction as an efficient tool for hydration free energy predictions
In: Abstracts of papers of the American Chemical Society, 241 (2011), 180-COMP
Bibtex

Johannes Rauh: Finding the maximizers of the information divergence from an exponential family
In: IEEE transactions on information theory, 57 (2011) 6, p. 3236-3247
Bibtex MIS-Preprint: 82/2009 DOI: 10.1109/TIT.2011.2136230 ARXIV: http://arxiv.org/abs/0912.4660
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Johannes Rauh: Finding the maximizers of the information divergence from an exponential family
Dissertation, Universität Leipzig, 2011
Bibtex LINK: http://nbn-resolving.de/urn:nbn:de:bsz:15-qucosa-77355
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Johannes Rauh ; Thomas Kahle and Nihat Ay: Support sets in exponential families and oriented matroid theory
In: International journal of approximate reasoning, 52 (2011) 5, p. 613-626
Bibtex MIS-Preprint: 28/2009 DOI: 10.1016/j.ijar.2011.01.013 ARXIV: http://arxiv.org/abs/0906.5462
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Christian M. Reidys ; Fenix W. D. Huang ; Jörgen E. Andersen ; Robert C. Penner ; Peter F. Stadler and Markus E. Nebel: Topology and prediction of RNA pseudoknots
In: Bioinformatics, 27 (2011) 8, p. 1076-1085
Bibtex DOI: 10.1093/bioinformatics/btr090

Erwin Riegler ; Veniamin I. Morgenshtern ; Giuseppe Durisi ; Shaowei Lin ; Bernd Sturmfels and Helmut Bölcskei: Noncoherent SIMO pre-log via resolution of singularities
In: IEEE international symposium on information theory proceedings (ISIT) 2011 : July 31-August 5, 2011 in St. Petersburg, Russia
Piscataway, NY : IEEE, 2011. - P. 2020-2024
Bibtex DOI: 10.1109/ISIT.2011.6033909 ARXIV: http://arxiv.org/abs/1105.6009
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Anastasia O. Romanova: Ion effects on a-cyclodextrin-aromatic carboxylic acids in aqueous solution : molecular mechanisms
In: Abstracts of papers of the American Chemical Society, 242 (2011), 59-AEI
Bibtex

Anastasia O. Romanova ; Andrey Frolov and Maxim V. Fedorov: Counter-ion effects on ionizable biomolecules in aqueous electrolyte solutions : understanding molecular mechanisms
In: Abstracts of papers of the American Chemical Society, 242 (2011), 396-COLL
Bibtex

Mikail Rubinov ; Joseph T. Lizier ; Mikhail Prokopenko and Michael Breakspear: Maximized directed information transfer in critical neuronal networks
In: Twentieth Annual Computational Neuroscience Meeting : CNS*2011 ; Stockholm, Schweden, 23-28 July 2011 / Jean-Marc Fellous... (eds.)
London : BioMed Central, 2011
(BMC neuroscience ; 12 ; Supplement 1)
Bibtex DOI: 10.1186/1471-2202-12-S1-P18

Habibollah Saeedi ; M. Mohseni Moghadam ; Nasibeh Mollahasani and Gennady N. Chuev: A CAS wavelet method for solving nonlinear Fredholm integro-differential equations of fractional order
In: Communications in nonlinear science and numerical simulation, 16 (2011) 3, p. 1154-1163
Bibtex MIS-Preprint: 4/2010 DOI: 10.1016/j.cnsns.2010.05.036
Repository Open Access

Habibollah Saeedi ; Nasibeh Mollahasani ; Mahmoud Mohseni Moghadam and Gennady N. Chuev: An operational Haar wavelet method for solving fractional Volterra integral equations
In: International journal of applied mathematics and computer science, 21 (2011) 3, p. 535-547
Bibtex MIS-Preprint: 80/2009 DOI: 10.2478/v10006-011-0042-x
Journal Open Access

Areejit Samal and Olivier Martin: Randomizing genome-scale metabolic networks
In: PLOS ONE, 6 (2011) 7, 22295
Bibtex MIS-Preprint: 74/2010 DOI: 10.1371/journal.pone.0022295 ARXIV: https://arxiv.org/abs/1012.1473
Journal Open Access

Areejit Samal ; Andreas Wagner and Olivier Martin: Environmental versatility promotes modularity in genome-scale metabolic networks
In: BMC systems biology, 5 (2011), 135
Bibtex MIS-Preprint: 39/2013 DOI: 10.1186/1752-0509-5-135
Journal Open Access

Raman Sanyal ; Frank Sottile and Bernd Sturmfels: Orbitopes
In: Mathematika : a journal of pure and applied mathematics, 57 (2011) 2, p. 275-314
Bibtex DOI: 10.1112/S002557931100132X ARXIV: http://arxiv.org/abs/0911.5436
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Lucia Scardia ; Anja Schlömerkemper and Chiara Zanini: Boundary layer energies for nonconvex discrete systems
In: Mathematical models and methods in applied sciences, 21 (2011) 4, p. 777-817
Bibtex MIS-Preprint: 4/2009 DOI: 10.1142/S0218202511005210
Repository Open Access

Christian Schindler: Niedrig-Rang-Approximation linearer Systeme mit Tensorprodukt-Struktur am Beispiel der Poisson-Gleichung
Diplomarbeit, Universität Leipzig, 2011
Bibtex

Susanne Schindler: Fitness-based mating : a systematic analysis of a new preference model
Dissertation, Universität Leipzig, 2011
Bibtex LINK: http://nbn-resolving.de/urn:nbn:de:bsz:15-qucosa-66485
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Stephan Schwinger: A posteriori error analysis of effective one-particle electronic structure calculations
Dissertation, Technische Universität Berlin, 2011
Bibtex

Christian Seis: Scaling laws in two models for thermodynamically driven fluid flow
Dissertation, Universität Leipzig, 2011
Bibtex LINK: http://nbn-resolving.de/urn:nbn:de:bsz:15-qucosa-81228
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Christian Seis ; Yann Brenier and Felix Otto: On the coarsening rates in demixing binary viscous liquids [In: Variational methods for evolution ; December 4th - December 10th, 2011 ; report no. 55/2011]
In: Oberwolfach reports, 8 (2011) 4, p. 3160-3162
Bibtex DOI: 10.4171/OWR/2011/55 LINK: https://publications.mfo.de/handle/mfo/3270
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Volodymyr Sergiievskyi: Model for calculating the free energy of hydration of bioactive compounds based on integral equation theory of liquids
In: Russian journal of physical chemistry / B, 5 (2011) 2, p. 326-331
Bibtex DOI: 10.1134/S1990793111020382

Volodymyr Sergiievskyi ; Wolfgang Hackbusch and Maxim V. Fedorov: Multigrid solver for the reference interaction site model of molecular liquids theory
In: Journal of computational chemistry, 32 (2011) 9, p. 1982-1992
Bibtex DOI: 10.1002/jcc.21783

Gautam C. Sethia ; Abhijit Sen and Fatihcan M. Atay: Phase-locked solutions and their stability in the presence of propagation delays
Journal Open Access

Christian Höner zu Siederdissen ; Stephan H. Bernhart ; Peter F. Stadler and Ivo L. Hofacker: A folding algorithm for extended RNA secondary structures
In: Bioinformatics, 27 (2011) 13, p. i129-i136
Bibtex DOI: 10.1093/bioinformatics/btr220
Journal Open Access

Mandy Sonntag ; Bernhard Englitz ; Marei Typlt and Rudolf Rübsamen: The calyx of Held develops adult-like dynamics and reliability by hearing onset in the mouse in vivo
In: The journal of neuroscience, 31 (2011) 18, p. 6699-6709
Bibtex DOI: 10.1523/JNEUROSCI.0575-11.2011

Emanuele Spadaro and Camillo De Lellis: On Almgren's center manifold and regularity of minimal surfaces [In: Partial differential equations ; August 7th - August 13th, 2011 ; report no. 38/2011]
In: Oberwolfach reports, 8 (2011) 3, p. 2187-2188
Bibtex DOI: 10.4171/OWR/2011/38 LINK: https://publications.mfo.de/handle/mfo/3253
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Andreas Spiegler ; Thomas R. Knösche ; Jens Haueisen and Fatihcan M. Atay: Complex behavior in a modified Jansen and Rit neural mass model
In: BMC neuroscience, 12 (2011) Suppl 1, P5
Bibtex DOI: 10.1186/1471-2202-12-S1-P5
Journal Open Access

Andreas Spiegler ; Thomas R. Knösche ; Karin Schwab ; Jens Haueisen and Fatihcan M. Atay: Modeling brain resonance phenomena using a neural mass model
In: PLoS computational biology, 7 (2011) 12, e1002298
Bibtex DOI: 10.1371/journal.pcbi.1002298
Journal Open Access

Peter F. Stadler and Dominic Rose: Molecular evolution of the non-coding eosinophil granule ontogeny transcript
Journal Open Access

Lydia Steiner ; Peter F. Stadler and Michael Dysouw: A Pipeline for computational historical linguistics
In: Language dynamics and change, 1 (2011) 1, p. 89-127
Bibtex DOI: 10.1163/221058211X570358 LINK: http://www.bioinf.uni-leipzig.de/publications/10-038
Journal Open Access

Rainer Stollhoff ; Jürgen Jost ; Tobias Elze and Ingo Kennerknecht: Deficits in long-term recognition memory reveal dissociated subtypes in congenital prosopagnosia
In: PLOS ONE, 6 (2011) 1, e15702
Bibtex MIS-Preprint: 2/2011 DOI: 10.1371/journal.pone.0015702
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Rainer Stollhoff ; Ingo Kennerknecht ; Tobias Elze and Jürgen Jost: A computational model of dysfunctional facial encoding in congenital prosopagnosia
In: Neural networks, 24 (2011) 6, p. 652-664
Bibtex MIS-Preprint: 9/2011 DOI: 10.1016/j.neunet.2011.03.006
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Hakim Tafer ; Fabian Amman ; Florian Eggenhofer ; Peter F. Stadler and Ivo L. Hofacker: Fast accessibility-based prediction of RNA-RNA interactions
In: Bioinformatics, 27 (2011) 14, p. 1934-1940
Bibtex DOI: 10.1093/bioinformatics/btr281

Andrea Tramontano ; Alexander Donath ; Stephan H. Bernhart ; Kristin Reiche ; Gudrun Boehmdorfer ; Peter F. Stadler and Andreas Bachmair: Deletion analysis of the 3 ' long terminal repeat sequence of plant retrotransposon Tto1 identifies 125 base pairs redundancy as sufficient for first strand transfer
In: Virology, 412 (2011) 1, p. 75-82
Bibtex DOI: 10.1016/j.virol.2010.12.059

Henry C. Tuckwell and Jürgen Jost: The effects of various spatial distributions of weak noise on rhythmic spiking
In: Journal of computational neuroscience, 30 (2011) 2, p. 361-371
Bibtex MIS-Preprint: 32/2010 DOI: 10.1007/s10827-010-0260-5
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Henry C. Tuckwell and Patrick Shipman: Predicting the probability of persistence of HIV infection with the standard model
In: Journal of biological systems, 19 (2011) 4, p. 747-762
Bibtex MIS-Preprint: 14/2011 DOI: 10.1142/S0218339011004147 ARXIV: http://arxiv.org/abs/1107.3459
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Alexander Ullrich ; Markus Rohrschneider ; Gerik Scheuermann ; Peter F. Stadler and Christoph Flamm: In silico evolution of early metabolism
In: Artificial life, 17 (2011) 2, p. 87-108
Bibtex DOI: 10.1162/artl_a_00021

Gilles Vieira ; Victor Sabarly ; Pierre-Yves Bourguignon ; Maxime Durot ; Francois Le Fevre ; Damien Mornico ; David Vallenet ; Odile Bouvet ; Erick Denamur ; Vincent Schachter and Claudine Medigue: Core and Panmetabolism in Escherichia coli
In: Journal of bacteriology, 193 (2011) 6, p. 1461-1472
Bibtex DOI: 10.1128/JB.01192-10

Ivan Vyalov ; Michael G. Kiselev ; T. Tassaing ; J. C. Soetens ; Maxim V. Fedorov ; P. Damay and A. Idrissi: Reorientation relaxation in supercritical ammonia
In: Journal of molecular liquids, 159 (2011) 1, p. 31-37
Bibtex DOI: 10.1016/j.molliq.2010.09.012

Marcus Wagner: Quasiconvex relaxation of multidimensional control problems with integrands f(t, e, v)
In: Control, optimisation and calculus of variations (ESAIM-COCV), 17 (2011) 1, p. 190-221
Bibtex MIS-Preprint: 68/2008 DOI: 10.1051/cocv/2010008
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X. Rosalind Wang ; Joseph T. Lizier and Mikhail Prokopenko: Fisher information at the edge of chaos in random boolean networks
In: Artificial life, 17 (2011) 4, p. 315-329
Bibtex DOI: 10.1162/artl_a_00041

X. Rosalind Wang ; Joseph T. Lizier and Joshua Wall: Information transfer analysis for ongoing commissioning of buildings
In: Second International Agent Technologies for Energy Systems (ATES 2011) : a workshop of the Tenth International Conference on Autonomous Agents and Multiagent Systems (AAMAS 2011) ; 2nd May 2011, Taipei, Taiwan
Bibtex LINK: http://lizier.me/joseph/publications/2011-Wang-InfoTransAnalysisForOngoingCommissioning.pdf

X. Rosalind Wang ; Jennifer M. Miller ; Joseph T. Lizier ; Mikhail Prokopenko and Louis F. Rossi: Measuring information storage and transfer in swarms
In: Advances in Artificial Life, ECAL 2011 : Proceedings of the Eleventh European Conference on the Synthesis and Simulation of Living Systems / Tom Lenarts (ed.)
Cambridge, MA : MIT Press, 2011. - P. 838-845
Bibtex LINK: http://lizier.me/joseph/publications/2011-Wang-MeasuringInfoStorageTransferInSwarms.pdf

Stefan Washietl ; Sven Findeiß ; Stephan A. Müller ; Stefan Kalkhof ; Martin von Bergen ; Ivo L. Hofacker ; Peter F. Stadler and Nick Goldman: RNAcode : robust discrimination of coding and noncoding regions in comparative sequence data
Repository Open Access

Alexander Wiebel ; Raymond Chan ; Christina Wolf ; Andrea Robitzki ; Angela Stevens and Gerik Scheuermann: Topological flow structures in a mathematical model for rotation-mediated cell aggregation
In: Topological methods in data analysis and visualization : theory, algorithms, and applications / Valerio Pascucci... (eds.)
Berlin [u. a.] : Springer, 2011. - P. 193-204
Bibtex DOI: 10.1007/978-3-642-15014-2_16

Ling Xu: On Galerkin approximations for the Zakai equation with diffusive and point process observations
Dissertation, Universität Leipzig, 2011
Bibtex LINK: http://nbn-resolving.de/urn:nbn:de:bsz:15-qucosa-65103
Repository Open Access

Eberhard Zeidler: Quantum field theory : a bridge between mathematicians and physicists. Vol. 3 : Gauge theory
Berlin : Springer, 2011. - XXXII, 1126 p.
ISBN 978-3-642-22421-8 ISBN 978-3-642-22420-1
Bibtex DOI: 10.1007/978-3-642-22421-8

Ming-Jing Zhao ; Zong-Guo Li ; Shao-Ming Fei ; Zhi-Xi Wang and Xianqing Li-Jost: Faithful teleportation with arbitrary pure or mixed resource states
In: Journal of physics / A, 44 (2011) 21, 215302
Bibtex MIS-Preprint: 46/2010 DOI: 10.1088/1751-8113/44/21/215302
Repository Open Access

Ming-Jing Zhao ; Zong-Guo Li ; Bo Li ; Shao-Ming Fei ; Zhi-Xi Wang and Xianqing Li-Jost: Nonlocality of two-qubit and three-qubit Schmidt-correlated states
In: Communications in theoretical physics, 56 (2011) 2, p. 253-257
Bibtex MIS-Preprint: 47/2010 DOI: 10.1088/0253-6102/56/2/10
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Ming-Jing Zhao ; Teng Ma ; Shao-Ming Fei and Zhi-Xi Wang: Inequalities detecting quantum entanglement for \(2\otimes d\) systems
In: Physical review / A, 83 (2011) 5, 052120
Bibtex MIS-Preprint: 58/2011 DOI: 10.1103/PhysRevA.83.052120
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Ming-Jing Zhao ; Xue-Na Zhu ; Shao-Ming Fei and Xianqing Li-Jost: Lower bound of concurrence and distillation for arbitrary dimensional bipartite quantum states
In: Physical review / A, 84 (2011) 6, 062322
Bibtex MIS-Preprint: 59/2011 DOI: 10.1103/PhysRevA.84.062322
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Liang Zheng and Wei Li: Thermoequilibrium statistics for a finite system with energy nonextensivity
In: Chinese science bulletin, 56 (2011) 34, p. 3666-3670
Bibtex DOI: 10.1007/s11434-011-4726-2
Journal Open Access

Björn Zocher ; Carsten Timm and P. M. R. Brydon: Effect of intraband Coulomb repulsion on the excitonic spin-density wave
In: Physical review / B, 84 (2011) 14, 144425
Bibtex DOI: 10.1103/PhysRevB.84.144425

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