Publications 2012
Abbondandolo, A.
and M. Schwarz:
On product structures in Floer homology of cotangent bundles
In: Global differential geometry / C.
Bär... (eds.)
Berlin : Springer, 2012. - P. 491-521
(Springer proceedings in mathematics ; 17)
MIS-Preprint: 76/2010 DOI: 10.1007/978-3-642-22842-1_16Andersen, J.
L. ; Flamm, C.
; Merkle, D.
and P. F. Stadler:
Maximizing output and recognizing autocatalysis in chemical reaction networks is NP-Complete
In: Journal of systems chemistry,
3 (2012) 1, 1
DOI: 10.1186/1759-2208-3-1 ARXIV: http://arxiv.org/abs/1110.6051Andersson, J.
and H. Mikayelyan:
On the non-tangential touch between the free and the fixed boundaries for the two-phase
obstacle-like problem
In: Mathematische Annalen,
352 (2012) 2, p. 357-372
MIS-Preprint: 41/2006 DOI: 10.1007/s00208-011-0647-2Atay, F.
M.:
Consensus in networks under transmission delays and the normalized Laplacian
In: Time delay systems : methods, applications and new trends / R.
Sipahi... (eds.)
Berlin [u.a.] : Springer, 2012. - P. 407-416
(Lecture notes in control and information sciences ; 423)
DOI: 10.1007/978-3-642-25221-1_31Atay, F.
M.:
On delay-induced stability in diffusively coupled discrete-time systems
In: Afrika matematika,
23 (2012) 1, p. 109-119
MIS-Preprint: 32/2011 DOI: 10.1007/s13370-011-0024-zAurada, M.
; Ferraz-Leite, S.
; Goldenits, P.
; Karkulik, M.
; Mayr, M.
and D.
Praetorius:
Convergence of adaptive BEM for some mixed boundary value problem
In: Applied numerical mathematics,
62 (2012) 4, p. 226-245
DOI: 10.1016/j.apnum.2011.03.008Aurada, M.
; Ferraz-Leite, S.
and D.
Praetorius:
Estimator reduction and convergence of adaptive BEM
In: Applied numerical mathematics,
62 (2012) 6, special issue, p. 787-801
DOI: 10.1016/j.apnum.2011.06.014Avdiyenko, L.
; Bertschinger, N.
and J. Jost:
Adaptive sequential feature selection for pattern classification
In: Proceedings of the 4th International Conference on Neural Computation Theory and Applications
(NCTA 2012), part of the International Joint Conference of Computational Intelligence
(IJCCI), Barcelona, Spain, October 5-7, 2012
MIS-Preprint: 42/2012 [S.l.] : INSTICC, 2012. - P. 474-482
Avdiyenko, L.
; Bertschinger, N.
and J. Jost:
Testing entropy-based search strategies for a visual classification task
In: BMC neuroscience,
13 (2012) Supl. 1, P109
DOI: 10.1186/1471-2202-13-S1-P109Ay, N.
; Bernigau, H.
; Der, R.
and M. Prokopenko:
Information-driven self-organization : the dynamical system approach to autonomous
robot behavior
In: Theory in biosciences,
131 (2012) 3, p. 161-179
DOI: 10.1007/s12064-011-0137-9Ay, N.
; Der, R.
and M. Prokopenko:
Guided self-organization : perception-action loops of embodied systems
In: Theory in biosciences,
131 (2012) 3, p. 125-127
DOI: 10.1007/s12064-011-0140-1Ay, N.
and W. Wenzel:
On solution sets of information inequalities
In: Kybernetika,
48 (2012) 5, p. 845-864
MIS-Preprint: 16/2011 LINK: http://www.kybernetika.cz/content/2012/5/845/paper.pdfBačák, M.
:
Note on a compactness characterization via a pursuit game
In: Geometriae dedicata,
160 (2012) 1, p. 195-197
MIS-Preprint: 81/2011 DOI: 10.1007/s10711-011-9676-yBačák, M.
; Searston, I.
and B.
Sims:
Alternating projections in CAT(0) spaces
In: Journal of mathematical analysis and applications,
385 (2012) 2, p. 599-607
MIS-Preprint: 51/2011 DOI: 10.1016/j.jmaa.2011.06.079Ballani, J.
:
Fast evaluation of near-field boundary integrals using tensor approximations
Dissertation, Universität Leipzig, 2012
LINK: http://nbn-resolving.de/urn:nbn:de:bsz:15-qucosa-97317Ballani, J.
:
Fast evaluation of singular BEM integrals based on tensor approximations
In: Numerische Mathematik,
121 (2012) 3, p. 433-460
MIS-Preprint: 77/2010 DOI: 10.1007/s00211-011-0436-6Banjai, L.
; Messner, M.
and M. Schanz:
Runge-Kutta convolution quadrature for the boundary element method
In: Computer methods in applied mechanics and engineering,
245 (2012), p. 90-101
DOI: 10.1016/j.cma.2012.07.007Banjai, L.
and D.
Peterseim:
Parallel multistep methods for linear evolution problems
In: IMA journal of numerical analysis,
32 (2012) 3, p. 1217-1240
MIS-Preprint: 26/2009 DOI: 10.1093/imanum/drq040Bauer, D.
; Stephenson, K.
and E.
Wegert:
Circle packings as differentiable manifolds
In: Beiträge zur Algebra und Geometrie,
53 (2012) 2, p. 399-420
DOI: 10.1007/s13366-011-0078-yBauer, F.
:
Normalized graph Laplace operator for directed graphs
In: Linear algebra and its applications,
436 (2012) 11, p. 4193-4222
DOI: 10.1016/j.laa.2012.01.020 ARXIV: http://arxiv.org/abs/1107.4847Bauer, F.
; Jost, J.
and S. Liu:
Ollivier-Ricci curvature and the spectrum of the normalized graph Laplace operator
In: Mathematical research letters,
19 (2012) 6, p. 1185-1205
MIS-Preprint: 25/2011 DOI: 10.4310/MRL.2012.v19.n6.a2 ARXIV: http://arxiv.org/abs/1105.3803Bauer, F.
and J. T. Lizier:
Identifying influential spreaders and efficiently estimating infection numbers in
epidemic models : a walk counting approach
In: epl,
99 (2012) 6, 68007
MIS-Preprint: 1/2012 DOI: 10.1209/0295-5075/99/68007 ARXIV: http://arxiv.org/abs/1203.0502Benner, P.
; Poppe, S.
and J.
P.
Bourguignon:
Bayesian non-parametric discovery of protein-binding sites
In: ECCS '12 Brussels : European Conference on Complex Systems 2012 ; Bruxelles, Sep 3-7,
2012
Bertoglio, C.
and B. N. Khoromskij:
Low-rank quadrature-based tensor approximation of the Galerkin projected Newton/Yukawa
kernels
In: Computer physics communications,
183 (2012) 4, p. 904-912
MIS-Preprint: 79/2008 DOI: 10.1016/j.cpc.2011.12.016Bertschinger, N.
:
Embedded probabilistic programming in Clojure
In: Proceedings of the 5th European Lisp Symposium
LINK: http://ozk.unizd.hr/proceedings/index.php/els/article/view/102/106Zadar, Croatia : University of Zadar, 2012. - P. 1-4
Blekherman, G.
; Hauenstein, J.
; Ottem, J.
C.
; Ranestad, K.
and B. Sturmfels:
Algebraic boundaries of Hilbert's SOS cones
In: Compositio mathematica,
148 (2012) 6, p. 1717-1735
DOI: 10.1112/S0010437X12000437 ARXIV: http://arxiv.org/abs/1107.1846Blesgen, T.
; Fraternali, F.
; Raney, J. R. ; Amendola, A. and C. Daraio:
Continuum limits of bistable spring models of carbon nanotube arrays accounting for
material damage
In: Mechanics research communications,
45 (2012), p. 58-63
DOI: 10.1016/j.mechrescom.2012.07.006 ARXIV: http://arxiv.org/abs/1112.2268Blesgen, T.
; Gavini, V.
and V. Khoromskaia:
Approximation of the electron density of aluminium clusters in tensor-product format
In: Journal of computational physics,
231 (2012) 6, p. 2551-2564
MIS-Preprint: 66/2009 DOI: 10.1016/j.jcp.2011.12.009Borchardt, M.
; Kleiber, R.
and W. Hackbusch:
A fast solver for the gyrokinetic field equation with adiabatic electrons
In: Journal of computational physics,
231 (2012) 18, p. 6207-6212
DOI: 10.1016/j.jcp.2012.06.001Brunnemann, J.
and C. Fleischhack:
Non-almost periodicity of parallel transports for homogeneous connections
In: Mathematical physics, analysis and geometry : an international journal devoted to
the theory and applications of analysis and geometry to physics,
15 (2012) 4, p. 299-315
DOI: 10.1007/s11040-012-9109-7 ARXIV: http://arxiv.org/abs/0709.1621Buss, G.
:
Higher Bers maps
In: The Asian journal of mathematics,
16 (2012) 1, p. 103-140
MIS-Preprint: 86/2008 LINK: http://projecteuclid.org/euclid.ajm/1331663453Buss, G.
and R. Leclerq:
Pseudo-distances on symplectomorphism groups and applications to flux theory
In: Mathematische Zeitschrift,
272 (2012) 3/4, p. 1001-1022
DOI: 10.1007/s00209-011-0970-zBär, C.
; Lohkamp, J.
and M. Schwarz (eds.):
Global differential geometry
Berlin : Springer, 2012. - VIII, 521 p.
(Springer proceedings in mathematics ; 17)
ISBN 978-3-642-22842-1
DOI: 10.1007/978-3-642-22842-1Böhm, J.
; Eisenbud, D.
and M. J. Nitsche:
Decomposition of semigroup algebras
In: Experimental mathematics,
21 (2012) 4, p. 385-394
MIS-Preprint: 67/2011 DOI: 10.1080/10586458.2012.688376 ARXIV: http://arxiv.org/abs/1110.3653Capella, A.
; Müller, S.
and F. Otto:
A constrained model for MSMA
In: Advanced engineering materials,
14 (2012) 8, p. 594-600
DOI: 10.1002/adem.201200095Capella, A.
and F. Otto:
A quantitative rigidity result for the cubic-to-tetragonal phase transition in the
geometrically linear theory with interfacial energy
In: Proceedings of the Royal Society of Edinburgh / A,
142 (2012) 2, p. 273-327
DOI: 10.1017/S0308210510000478Chen, H.
and J. Jost:
Minimum vertex covers and the spectrum of the normalized Laplacian on trees
In: Linear algebra and its applications,
437 (2012) 4, p. 1089-1101
DOI: 10.1016/j.laa.2012.04.005 ARXIV: http://arxiv.org/abs/1010.4269Chen, Q.
; Jost, J.
and H. Qiu:
Existence and Liouville theorems for \(V\)-harmonic maps from complete manifolds
In: Annals of global analysis and geometry,
42 (2012) 4, p. 565-584
MIS-Preprint: 75/2014 DOI: 10.1007/s10455-012-9327-zChen, Q.
; Jost, J.
and G. Wang:
The maximum principle and the Dirichlet problem for Dirac-harmonic maps
In: Calculus of variations and partial differential equations,
47 (2012) 1/2, p. 87-116
MIS-Preprint: 18/2012 DOI: 10.1007/s00526-012-0512-5Chinnamsetty, S.
R.
; Luo, H.
; Hackbusch, W.
; Flad, H.
and A. Uschmajew:
Bridging the gap between quantum Monte Carlo and F12-methods
In: Chemical physics,
401 (2012), p. 36-44
MIS-Preprint: 68/2011 DOI: 10.1016/j.chemphys.2011.09.019Chuev, G.
N. ; Valiev, M.
and M. V. Fedotova:
Integral equation theory of molecular solvation coupled with quantum mechanical/molecular
mechanics method in NWChem package
In: Journal of chemical theory and computation,
8 (2012) 4, p. 1246-1254
DOI: 10.1021/ct2009297Coville, J.
:
Harnack type inequality for positive solution of some integral equation
In: Annali di matematica pura ed applicata,
191 (2012) 3, p. 503-528
DOI: 10.1007/s10231-011-0193-2De Loera, J.
A. ; Sturmfels, B.
and C.
Vinzant:
The central curve in linear programming
In: Foundations of computational mathematics,
12 (2012) 4, p. 509-540
DOI: 10.1007/s10208-012-9127-7 ARXIV: http://arxiv.org/abs/1012.3978Deng, W.
; Li, W.
; Cai, X.
; Bulou, A.
and Q.
A.
Wang:
Universal scaling in sports ranking
In: New journal of physics,
14 (2012) 9, 093038
DOI: 10.1088/1367-2630/14/9/093038Dolgov, S.
; Khoromskij, B.
N. and I. V. Oseledets:
Fast solution of parabolic problems in the tensor train/quantized tensor train format
with initial application to the Fokker-Planck equation
In: SIAM journal on scientific computing,
34 (2012) 6, p. A3016-A3038
MIS-Preprint: 80/2011 DOI: 10.1137/120864210Dolgov, S.
; Khoromskij, B.
N. ; Oseledets, I.
V. and E. E. Tyrtyshnikov:
Low-rank tensor structure of solutions to elliptic problems with jumping coefficients
In: Journal of computational mathematics,
30 (2012) 1, p. 14-23
MIS-Preprint: 12/2011 DOI: 10.4208/jcm.1110-m11si08Dolgov, S.
; Khoromskij, B.
N. ; Oseledets, I.
V. and E. E. Tyrtyshnikov:
A reciprocal preconditioner for structured matrices arising from elliptic problems
with jumping coefficients
In: Linear algebra and its applications,
436 (2012) 9, p. 2980-3007
MIS-Preprint: 55/2010 DOI: 10.1016/j.laa.2011.09.010Dolgov, S.
; Khoromskij, B.
N. and D. V. Savostyanov:
Superfast Fourier transform using QTT approximation
In: The journal of Fourier analysis and applications,
18 (2012) 5, p. 915-953
MIS-Preprint: 18/2011 DOI: 10.1007/s00041-012-9227-4Dress, A.
W. M. ; Huber, K.
T. ; Koolen, J.
; Moulton, V.
and A.
Spillner (eds.):
Basic phylogenetic combinatorics
Cambridge : Cambridge University Press, 2012. - XII, 264 p.
ISBN 978-0-521-76832-0
Dress, A.
W. M. ; Huber, K.
T. and M.
Steel:
'Lassoing' a phylogenetic tree. Pt. 1 : Basic properties, shellings, and covers
In: Journal of mathematical biology,
65 (2012) 1, p. 77-105
DOI: 10.1007/s00285-011-0450-4Dress, A.
W. M. and Y.
Wu:
Phylogenetic analysis and mod 2 homology
In: Forum mathematicum,
24 (2012) 3, p. 495-505
DOI: 10.1515/form.2011.070Döring, L.
; Esselborn, E.
; Ferraz-Leite, S.
and F. Otto:
Domain configurations in soft ferromagnetic films under external field
In: Proceedings of MATHMOD 2012 - 7th Vienna International Conference on Mathematical
Modelling, Vienna, February 15 - 17, 2012
MIS-Preprint: 3/2012 DOI: 10.3182/20120215-3-AT-3016.00087Vienna : International Federation of Automatic Control, 2012. - P. 498-503
Eggeling, R.
; Bourguignon, P.
; Gohr, A.
and I.
Grosse:
Gibbs sampling for parsimonious Markov models with latent variables
In: Proceedings of the sixth european workshop on probabilistic graphical models, PGM'12
: Granada, Spain, September 19-21, 2012 / T.
Nielsen (ed.)
LINK: http://leo.ugr.es/pgm2012/proceedings/eproceedings/eggeling_gibbs.pdfGranada : DECSAI, 2012. - P. 91-98
Ehrig, T.
and J. Jost:
Reflexive expectation formation
In: American Economic Association Meeting 2012 ; Hyatt Regency, Acapulco
LINK: http://www.aeaweb.org/aea/2012conference/program/retrieve.php?pdfid=631Nashville, TN : American Economic Association, 2012
Elze, T.
and T. G. Tanner:
Temporal properties of liquid crystal displays : implications for vision science experiments
In: PLoS one,
7 (2012) 9, e44048
DOI: 10.1371/journal.pone.0044048Engelhardt, J. and P. F. Stadler:
Hidden treasures in unspliced EST data
In: Theory in biosciences,
131 (2012) 1, p. 49-57
DOI: 10.1007/s12064-012-0151-6Espejo Arenas, E.
E.
; Stevens, A.
and T. Suzuki:
Simultaneous blowup and mass separation during collapse in an interacting system of
chemotactic species
In: Differential and integral equations,
25 (2012) 3/4, p. 251-288
MIS-Preprint: 64/2011 LINK: http://projecteuclid.org/euclid.die/1356012736Espig, M.
and W. Hackbusch:
A regularized Newton method for the efficient approximation of tensors represented
in the canonical tensor format
In: Numerische Mathematik,
122 (2012) 3, p. 489-525
MIS-Preprint: 78/2010 DOI: 10.1007/s00211-012-0465-9Espig, M.
; Hackbusch, W.
; Handschuh, S.
and R. Schneider:
Optimization problems in contracted tensor networks
In: Computing and visualization in science,
14 (2011) 6, p. 271-285
MIS-Preprint: 66/2011 DOI: 10.1007/s00791-012-0183-yEspig, M.
; Hackbusch, W.
; Rohwedder, T.
and R. Schneider:
Variational calculus with sums of elementary tensors of fixed rank
In: Numerische Mathematik,
122 (2012) 3, p. 469-488
MIS-Preprint: 52/2009 DOI: 10.1007/s00211-012-0464-xEspig, M.
; Naraparaju, K.
K.
and J. Schneider:
A note on tensor chain approximation
In: Computing and visualization in science,
15 (2012) 6, p. 331-344
MIS-Preprint: 16/2012 DOI: 10.1007/s00791-014-0218-7Falcó, A.
and W. Hackbusch:
On minimal subspaces in tensor representations
In: Foundations of computational mathematics,
12 (2012) 6, p. 765-803
MIS-Preprint: 70/2010 DOI: 10.1007/s10208-012-9136-6Fedorov, M.
V. and R. M. Lynden-Bell:
Probing the neutral graphene-ionic liquid interface: insights from molecular dynamics
simulations
In: Physical chemistry, chemical physics,
14 (2012) 8, p. 2552-2556
DOI: 10.1039/C2CP22730DFerraz-Leite, S.
; Melenk, J.
M.
and D.
Praetorius:
Numerical quadratic energy minimization bound to convex constraints in thin-film micromagnetics
In: Numerische Mathematik,
122 (2012) 1, p. 101-131
MIS-Preprint: 55/2011 DOI: 10.1007/s00211-012-0454-zFiliz, I.
O.
; Guo, X.
; Morton, J.
and B. Sturmfels:
Graphical models for correlated defaults
In: Mathematical finance : an international journal of mathematics, statistics and financial
economics,
22 (2012) 4, p. 621-644
DOI: 10.1111/j.1467-9965.2011.00499.x ARXIV: https://arxiv.org/abs/0809.1393Finn, R.
; McCuan, J.
and H. C. Wente:
Thomas Young's surface tension diagram : its history, legacy, and irreconcilabilities
In: Journal of mathematical fluid mechanics,
14 (2012) 3, p. 445-453
MIS-Preprint: 71/2010 DOI: 10.1007/s00021-011-0079-5Finster, F.
; Müller, O.
; Nardmann, M.
; Tolksdorf, J.
and E. Zeidler (eds.):
Quantum field theory and gravity : conceptual and mathematical advances in the search
for a unified framework. [Papers based on the presentations at the conference, Regensburg,
Germany, September 28 to October 1, 2010]
Basel : Springer, 2012. - XIV, 380 p.
ISBN 978-3-0348-0042-6 ISBN 978-3-0348-0043-3
DOI: 10.1007/978-3-0348-0043-3Finster, F.
and J. Tolksdorf:
Bosonic loop diagrams as perturbative solutions of the classical field equations in
\( \phi^4\)-theory
In: Journal of mathematical physics,
53 (2012) 5, 052305
MIS-Preprint: 12/2012 DOI: 10.1063/1.4718333 ARXIV: http://arxiv.org/abs/1201.5497Frolov, A.
; Arif, R.
N. ; Kolar, M.
; Romanova, A.
O. ; Fedorov, M.
V. and A. G. Rozhin:
Molecular mechanisms of salt effects on carbon nanotube dispersions in an organic
solvent (N-methyl-2-pyrrolidone)
In: Chemical science,
3 (2012) 2, p. 541-548
DOI: 10.1039/C1SC00232EFrolov, A.
; Kirchner, K.
; Kirchner, T.
and M. V. Fedorov:
Molecular-scale insights into the mechanisms of ionic liquids interactions with carbon
nanotubes
In: Faraday discussions,
154 (2012), p. 235-247
DOI: 10.1039/C1FD00080BGao, Z.
; Gu, J.
and W. Li:
Epidemic spreading in a multi-compartment system
In: Chinese physics letters,
29 (2012) 2, 028902
DOI: 10.1088/0256-307X/29/2/028902Getmanenko, A.
:
On eigenfunctions corresponding to a small resurgent eigenvalue
In: Asymptotic analysis,
76 (2012) 2, p. 87-114
DOI: 10.3233/ASY-2011-1068 ARXIV: http://arxiv.org/abs/0809.0439Giani, S.
; Grubisic, L.
and J. S. Ovall:
Benchmark results for testing adaptive finite element eigenvalue procedures
In: Applied numerical mathematics,
62 (2012) 2, p. 121-140
DOI: 10.1016/j.apnum.2011.10.007Gloria, A.
and F. Otto:
An optimal error estimate in stochastic homogenization of discrete elliptic equations
In: The annals of applied probability,
22 (2012) 1, p. 1-28
MIS-Preprint: 28/2010 DOI: 10.1214/10-AAP745 ARXIV: http://de.arxiv.org/abs/1203.0908Gnann, M.
V. and T.
Voigtmann:
Asymptotic analysis of mode-coupling theory of active nonlinear microrheology
In: Physical review / E,
86 (2012) 1, 011406
MIS-Preprint: 22/2012 DOI: 10.1103/PhysRevE.86.011406 ARXIV: http://arxiv.org/abs/1204.2407Gogatishvili, A.
; Pick, L.
and J. Schneider:
Characterization of a rearrangement-invariant hull of a Besov space via interpolation
In: Revista matematica complutense,
25 (2012) 1, p. 267-283
DOI: 10.1007/s13163-011-0067-6Goreinov, S. A. ; Oseledets, I.
V. and D. V. Savostyanov:
Wedderburn rank reduction and Krylov subspace method for tensor approximation. Pt.
1: Tucker case
In: SIAM journal on scientific computing,
34 (2012) 1, p. A1-A27
DOI: 10.1137/100792056Grünewald, S.
:
Slim sets of binary trees
In: Journal of combinatorial theory / A,
119 (2012) 2, p. 323-330
DOI: 10.1016/j.jcta.2011.09.007Hackbusch, W.
:
Tensor spaces and numerical tensor calculus
Heidelberg : Springer, 2012. - XXIV, 500 p.
(Springer series in computational mathematics ; 42)
ISBN 978-3-642-28026-9 ISBN 978-3-642-28027-6
DOI: 10.1007/978-3-642-28027-6Hackbusch, W.
and F. Drechsler:
Partial evaluation of the discrete solution of elliptic boundary value problems
In: Computing and visualization in science,
15 (2012) 5, p. 227-245
MIS-Preprint: 59/2012 DOI: 10.1007/s00791-013-0211-6Hackbusch, W.
; John, V.
; Khachatryan, A.
and C.
Suciu:
A numerical method for the simulation of an aggregation-driven population balance
system
In: International journal for numerical methods in fluids,
69 (2012) 10, p. 1646-1660
DOI: 10.1002/fld.2656Hackbusch, W.
; Khoromskij, B.
N. ; Sauter, S.
A. and E. E. Tyrtyshnikov:
Use of tensor formats in elliptic eigenvalue problems
In: Numerical linear algebra with applications,
19 (2012) 1, p. 133-151
MIS-Preprint: 78/2008 DOI: 10.1002/nla.793Hellmuth, M.
; Ostermeier, L.
and P. F. Stadler:
Diagonalized Cartesian products of S-prime graphs are S-prime
In: Discrete mathematics,
312 (2012) 1, p. 74-80
DOI: 10.1016/j.disc.2011.03.033Hellmuth, M.
; Ostermeier, P.
and P. F. Stadler:
Minimum cycle bases of lexicographic products
In: Ars mathematica contemporanea,
5 (2012) 2, p. 223-234
Hellmuth, M.
; Ostermeier, P.
and P. F. Stadler:
Minimum cycle bases of lexicographic products
In: Ars mathematica contemporanea,
5 (2012) 2, p. 223-234
LINK: http://amc-journal.eu/index.php/amc/article/view/172Helm, M.
; Mörl, M.
; Stadler, P.
F. and S.
Hoffmann:
Biochemie 2011 : RNA - deep sequencing
In: Nachrichten aus der Chemie,
60 (2012) 3, p. 300-307
DOI: 10.1002/nadc.201290120Hernández Rosales, M.
; Hellmuth, M.
; Wieseke, N.
; Huber, K.
T. ; Moulton, V.
and P. F. Stadler:
From event-labeled gene trees to species trees
In: BMC bioinformatics,
13 (2012) Supplement 19, S6
DOI: 10.1186/1471-2105-13-S19-S6Hertel, J.
; Bartschat, S.
; Wintsche, A.
; Otto, C.
and P. F. Stadler:
Evolution of the let-7 microRNA family
In: RNA biology,
9 (2012) 3, p. 231-241
DOI: 10.4161/rna.18974 LINK: http://www.bioinf.uni-leipzig.de/publications/11-022Hofacker, I.
L. ; Reidys, C.
M. and P. F. Stadler:
Symmetric circular matchings and RNA folding
In: Discrete mathematics,
312 (2012) 1, p. 100-112
DOI: 10.1016/j.disc.2011.06.004Horak, D.
:
Combinatorial Laplace operators on simplicial complexes
Dissertation, Universität Leipzig, 2012
Huber, A.
:
Boundary regularity for minimizers of the micromagnetic energy functional
In: Calculus of variations and partial differential equations,
43 (2012) 1/2, p. 1-23
DOI: 10.1007/s00526-011-0400-4 ARXIV: http://arxiv.org/abs/1006.4766Izadi, M.
:
Hierarchical matrix techniques on massively parallel computers
Dissertation, Universität Leipzig, 2012
LINK: http://nbn-resolving.de/urn:nbn:de:bsz:15-qucosa-101164Izadi, M.
:
Parallel \(\mathscr {H}\)-matrix arithmetic on distributed-memory systems
In: Computing and visualization in science,
15 (2012) 2, p. 87-97
MIS-Preprint: 73/2012 DOI: 10.1007/s00791-013-0198-zJafri, H.
H.
; Thounaojam, U.
S.
and R.
Ramaswamy:
Phantom instabilities in adiabatically driven systems : dynamical sensitivity to computational
precision
In: Chaos,
22 (2012) 3, 033103
DOI: 10.1063/1.4732542Janzing, D.
; Mooij, J.
; Zhang, K.
; Lemeire, J.
; Zscheischler, J.
; Daniusis, P.
; Steudel, B.
and B.
Schölkopf:
Information-geometric approach to inferring causal directions
In: Artificial intelligence,
182/183 (2012), p. 1-31
DOI: 10.1016/j.artint.2012.01.002Jin, Y.
; Jost, J.
and G. Wang:
A nonlocal version of the Osher-Sole-Vese model
In: Journal of mathematical imaging and vision,
44 (2012) 2, p. 99-113
DOI: 10.1007/s10851-011-0313-zJost, J.
; Ma, X.
and Q. Z. Ou:
Curvature estimates in dimensions 2 and 3 for the level sets of p-harmonic functions
in convex rings
In: Transactions of the American Mathematical Society,
364 (2012) 9, p. 4605-4627
DOI: 10.1090/S0002-9947-2012-05436-5Jost, J.
; Xin, Y.
and L. Yang:
The regularity of harmonic maps into spheres and applications to Bernstein problems
In: Journal of differential geometry,
90 (2012) 1, p. 131-176
MIS-Preprint: 78/2009 LINK: http://projecteuclid.org/euclid.jdg/1335209491Jühling, F.
; Pütz, J.
; Bernt, M.
; Donath, A.
; Middendorf, M.
; Florentz, C.
and P. F. Stadler:
Improved systematic tRNA gene annotation allows new insights into the evolution of
mitochondrial tRNA structures and into the mechanisms of mitochondrial genome rearrangements
In: Nucleic acids research,
40 (2012) 7, p. 2833-2845
DOI: 10.1093/nar/gkr1131 LINK: http://www.bioinf.uni-leipzig.de/publications/12-010Jühling, F.
; Pütz, J.
; Florentz, C.
and P. F. Stadler:
Armless mitochondrial tRNAs in enoplea (nematoda)
In: RNA biology,
9 (2012) 9, p. 1161-1166
DOI: 10.4161/rna.21630Kahle, T.
:
Erratum to 'Neighborliness of marginal polytopes'
In: Beiträge zur Algebra und Geometrie,
53 (2012) 1, p. 295-295
DOI: 10.1007/s13366-011-0020-3Kazeev, V.
A. and B. N. Khoromskij:
Low-Rank explicit QTT representation of the Laplace operator and inverse
In: SIAM journal on matrix analysis and applications,
33 (2012) 3, p. 742-758
MIS-Preprint: 75/2010 DOI: 10.1137/100820479Khoromskaia, V.
; Andrae, D.
and B. N. Khoromskij:
Fast and accurate 3D tensor calculation of the Fock operator in a general basis
In: Computer physics communications,
183 (2012) 11, p. 2392-2404
MIS-Preprint: 4/2012 DOI: 10.1016/j.cpc.2012.06.007Khoromskij, B.
N.:
Tensors-structured numerical methods in scientific computing : survey on recent advances
In: Chemometrics and intelligent laboratory systems,
110 (2012) 1, p. 1-19
MIS-Preprint: 21/2010 DOI: 10.1016/j.chemolab.2011.09.001Kirkilionis, M.
and F. M. Atay:
Introduction to Special Issue ECCS'10 in Theory in Biosciences
In: Theory in biosciences,
131 (2012) 2, p. 59-60
DOI: 10.1007/s12064-012-0155-2Kitavtsev, G.
and S. Luckhaus:
Twinned martensite configurations arising as ground states of a two-well discrete
Hamiltonian
In: Proceedings in applied mathematics and mechanics,
12 (2012) 1, p. 15-18
DOI: 10.1002/pamm.201210005Klemm, K.
; Mehta, A.
and P. F. Stadler:
Landscape encodings enhance optimization
In: PLoS one,
7 (2012) 4, e34780
DOI: 10.1371/journal.pone.0034780Klemm, K.
; Mehta, A.
and P. F. Stadler:
Landscape encoding : faster optimization in larger spaces
In: PLoS one,
7 (2012) 4, e34780
DOI: 10.1371/journal.pone.0034780 ARXIV: http://arxiv.org/abs/1104.5024Kosiuk, I.
:
Relaxation oscillations in slow-fast systems beyond the standard form
Dissertation, Universität Leipzig, 2012
LINK: http://nbn-resolving.de/urn:nbn:de:bsz:15-qucosa-100566Kühn, S.
:
Hierarchische Tensordarstellung
Dissertation, Universität Leipzig, 2012
LINK: http://nbn-resolving.de/urn:nbn:de:bsz:15-qucosa-98906Langenberger, D.
; Pundhir, S.
; Ekstroem, C.
T. ; Stadler, P.
F. ; Hoffmann, S.
and J.
Gorodkin:
deepBlockAlign : a tool for aligning RNA-seq profiles of read block patterns
In: Bioinformatics,
28 (2012) 1, p. 17-24
DOI: 10.1093/bioinformatics/btr598Lessa, F.
A. ; Raiol, T.
; Brigido, M.
M. ; Martins Neto, D.
S. B. ; Walter, M.
Emilia M. T. and P. F. Stadler:
Clustering Rfam 10.1 : clans, families, and classes
In: Genes,
3 (2012) 3, p. 378-390
DOI: 10.3390/genes3030378Li, B.
; Fei, S.
; Wang, Z.
and H.
Fan:
Assisted state discrimination without entanglement
In: Physical review / A,
85 (2012) 2, 022328
MIS-Preprint: 11/2012 DOI: 10.1103/PhysRevA.85.022328Li, M.
and S. Fei:
Bell inequalities for multipartite qubit quantum systems and their maximal violation
In: Physical review / A,
86 (2012) 5, 052119
MIS-Preprint: 27/2013 DOI: 10.1103/PhysRevA.86.052119Li, M.
and S. Fei:
Method for measuring the entanglement of formation for arbitrary-dimensional pure
states
In: Physical review / A,
85 (2012) 1, 014304
MIS-Preprint: 9/2012 DOI: 10.1103/PhysRevA.85.014304Li, M.
; Yan, T.
and S. Fei:
Entanglement detection and lower bound of the convex-roof extension of the negativity
In: Journal of physics / A,
45 (2012) 3, 035301
MIS-Preprint: 10/2012 DOI: 10.1088/1751-8113/45/3/035301Li, Z.
; Zhao, M.
; Fei, S.
; Fan, H.
and W. M. Liu:
Mixed maximally entangled states
In: Quantum information and computation,
12 (2012) 1/2, p. 63-73
MIS-Preprint: 8/2012 LINK: http://www.rintonpress.com/xxqic12/qic-12-12/0063-0073.pdfLin, C.
:
L2-flow of elastic curves with clamped boundary conditions
In: Journal of differential equations,
252 (2012) 12, p. 6414-6428
DOI: 10.1016/j.jde.2012.03.010Liu, S.
:
Synthetic notions of curvature and applications in graph theory
Dissertation, Universität Leipzig, 2012
LINK: http://nbn-resolving.de/urn:nbn:de:bsz:15-qucosa-102197Lizier, J.
T. ; Atay, F.
M. and J. Jost:
Information storage, loop motifs and clustered structure in complex networks
In: Physical review / E,
86 (2012) 2, 026110
MIS-Preprint: 71/2011 DOI: 10.1103/PhysRevE.86.026110Lizier, J.
T. ; Prokopenko, M.
and A.
Y. Zomaya:
Local measures of information storage in complex distributed computation
In: Information sciences,
208 (2012), p. 39-54
DOI: 10.1016/j.ins.2012.04.016Lizier, J.
T. ; Prokopenko, M.
and A. Y. Zomaya:
Coherent information structure in complex computation
In: Theory in biosciences,
131 (2012) 3, p. 193-203
DOI: 10.1007/s12064-011-0145-9Logaritsch, P.
and E. Spadaro:
A representation formula for the p-energy of metric space-valued Sobolev maps
In: Communications in contemporary mathematics,
14 (2012) 6, 1250043
MIS-Preprint: 77/2011 DOI: 10.1142/S0219199712500435 ARXIV: http://arxiv.org/abs/1112.0122Lorenz, R.
; Bernhart, S.
H. ; Externbrink, F.
; Qin, J.
; Siederdissen, C.
H.
; Amman, F.
; Hofacker, I.
L. and P. F. Stadler:
RNA folding algorithms with g-quadruplexes
In: Advances in bioinformatics and computational biology : 7th Brazilian Symposium on
Bioinformatics, BSB 2012, Campo Grande, Brazil, August 15-17, 2012 ; proceedings / M.
C. de Souto... (eds.)
Berlin [u. a.] : Springer, 2012. - P. 49-60
(Lecture notes in computer science ; 7409)
DOI: 10.1007/978-3-642-31927-3_5Louca, S.
; Ibanez, S.
; Piau, D.
and L.
Despres:
Specialized nursery pollination mutualisms as evolutionary traps stabilized by antagonistic
traits
In: Journal of theoretical biology,
296 (2012), p. 65-83
DOI: 10.1016/j.jtbi.2011.11.028Luckhaus, S.
; Sugiyama, Y. and J. J. L. Velázquez:
Measure valued solutions of the 2D Keller-Segel system
In: Archive for rational mechanics and analysis,
206 (2012) 1, p. 31-80
DOI: 10.1007/s00205-012-0549-9 ARXIV: https://arxiv.org/abs/1011.0282Luo, H.
:
Transcorrelated calculations of homogeneous electron gases
In: The journal of chemical physics,
136 (2012) 22, 224111
DOI: 10.1063/1.4727852Luo, H.
; Horowitz, C.
M. ; Flad, H.
; Proetto, C.
and W. Hackbusch:
Direct comparison of optimized effective potential and Hartree-Fock self-consistent
calculations for jellium slabs
In: Physical review / B,
85 (2012) 16, 165133
DOI: 10.1103/PhysRevB.85.165133Lynden-Bell, R.
M. ; Frolov, A.
and M. V. Fedorov:
Electrode screening by ionic liquids
In: Physical chemistry, chemical physics,
14 (2012) 8, p. 2693-2701
DOI: 10.1039/c2cp23267gLöhr, W.
:
Predictive models and generative complexity
In: Journal of systems science and complexity,
25 (2012) 1, p. 30-45
DOI: 10.1007/s11424-012-9173-xLöhr, W.
; Szkoła, A.
and N. Ay:
Process dimension of classical and non-commutative processes
In: Open systems and information dynamics,
19 (2012) 1, 1250007
MIS-Preprint: 52/2011 DOI: 10.1142/S1230161212500072 ARXIV: http://arxiv.org/abs/1108.3984Ma, Z.
; Chen, Z.
; Han, S.
; Fei, S.
and S.
Severini:
Improved bounds on negativity of superpositions
In: Quantum information and computation,
12 (2012) 11/12, p. 0983-0988
MIS-Preprint: 53/2012 Maletic, S.
; Horak, D.
and M.
Rajkovic:
Cooperation, conflict and higher-order structures of social networks
In: Advances in complex systems,
15 (2012) 1, supplement, 1250055
DOI: 10.1142/S0219525912500555Man, Z.
; Xia, Y.
and S. Fei:
Equation of motion for multiqubit entanglement in multiple independent noisy channels
In: Journal of physics / A,
45 (2012) 19, 195306
MIS-Preprint: 44/2012 DOI: 10.1088/1751-8113/45/19/195306Martius, G.
and J.
M.
Herrmann:
Variants of guided self-organization for robot control
In: Theory in biosciences,
131 (2012) 3, p. 129-137
DOI: 10.1007/s12064-011-0141-0Massamba, F.
:
Screen almost conformal lightlike geometry in indefinite Kenmotsu space forms
In: International Electronic Journal of Geometry,
5 (2012) 2, p. 36-58
MIS-Preprint: 38/2011 Massamba, F.
:
On lightlike geometry in indefinite Kenmotsu manifolds
In: Mathematica Slovaca,
62 (2012) 2, p. 315-344
MIS-Preprint: 38/2009 DOI: 10.2478/s12175-012-0012-2McDonough, J.
K. ; Frolov, A.
; Presser, V.
; Niu, J.
; Miller, C.
H. ; Ubieto, T.
; Fedorov, M.
V. and Y.
Gogotsi:
Influence of the structure of carbon onions on their electrochemical performance in
supercapacitor electrodes
In: Carbon,
50 (2012) 9, p. 3298-3309
DOI: 10.1016/j.carbon.2011.12.022Meszmer, P.
:
Hierarchische Integration und der Strahlungstransport in streuenden Medien
Dissertation, Universität Leipzig, 2012
LINK: http://nbn-resolving.de/urn:nbn:de:bsz:15-qucosa-98584Meszmer, P.
and J. Ballani:
Tensor structured evaluation of singular volume integrals
In: Computing and visualization in science,
15 (2012) 2, p. 75-86
MIS-Preprint: 70/2012 DOI: 10.1007/s00791-013-0199-yMontúfar, G.
:
On the expressive power of discrete mixture models, restricted Boltzmann machines,
and deep belief networks - a unified mathematical treatment
Dissertation, Universität Leipzig, 2012
LINK: http://personal-homepages.mis.mpg.de/montufar/PhDthesisGuidoMontufar.pdfMontúfar, G.
and J.
Morton:
When does a mixture of products contain a product of mixtures?
In: NIPS 2012 - deep learning and unsupervised feature learning workshop : [be held in
conjunction with neural information processing systems on December 8, 2012 (TBD) at
Lake Tahoe, USA]
MIS-Preprint: 98/2014 ARXIV: http://arxiv.org/abs/1206.0387La Jolla, CA : Neural Information Processing Systems, 2012
Montúfar, G.
and J. Rauh:
Scaling of model approximation errors and expected entropy distances
In: Proceedings of the 9th workshop on uncertainty processing WUPES '12 : Marianske Lazne,
Czech Republik ; 12-15th September 2012
ARXIV: http://de.arxiv.org/abs/1207.3399 LINK: http://wupes.fm.vse.cz/2012/data/Wupes12_proceedings.pdfPraha : Academy of Sciences of the Czech Republik / Institute of Information Theory and Automation, 2012. - P. 137-148
Mora, M.
G.
and L. Scardia:
Convergence of equilibria of thin elastic plates under physical growth conditions
for the energy density
In: Journal of differential equations,
252 (2012) 1, p. 35-55
MIS-Preprint: 15/2009 DOI: 10.1016/j.jde.2011.09.009 ARXIV: https://arxiv.org/abs/0901.4041Moritz, P.
; Reichardt, J.
and N. Ay:
A new common cause principle for bayesian networks
In: Proceedings of the 9th workshop on uncertainty processing WUPES '12 : Marianske Lazne,
Czech Republik ; 12-15th September 2012
LINK: http://wupes.fm.vse.cz/2012/data/Wupes12_proceedings.pdfPraha : Academy of Sciences of the Czech Republik / Institute of Information Theory and Automation, 2012. - P. 149-162
Movshev, M.
and A.
Schwarz:
Supersymmetric deformations of maximally supersymmetric Gauge theories
In: Journal of high energy physics,
2012 (2012) 9, 136
MIS-Preprint: 60/2009 DOI: 10.1007/JHEP09(2012)136 ARXIV: https://arxiv.org/abs/0910.0620Much, A.
:
Wedge-local quantum fields on a nonconstant noncommutative spacetime
In: Journal of mathematical physics,
53 (2012) 8, 082303
MIS-Preprint: 36/2012 DOI: 10.1063/1.4739751 ARXIV: http://arxiv.org/abs/1206.4450Naraparaju, K.
K.
and G.
N.
Raju:
Nonconforming least-squares method for elliptic partial differential equations with
smooth interfaces
In: Journal of scientific computing,
53 (2012) 2, p. 295-319
MIS-Preprint: 34/2010 DOI: 10.1007/s10915-011-9572-5Neukamm, S.
:
Rigorous derivation of a homogenized bending-torsion theory for inextensible rods
from three-dimensional elasticity
In: Archive for rational mechanics and analysis,
206 (2012) 2, p. 645-706
MIS-Preprint: 74/2011 DOI: 10.1007/s00205-012-0539-yNitsche, M.
J.
:
Zur Eisenbud-Goto-Vermutung für affine Halbgruppenringe
Dissertation, Universität Leipzig, 2012
Nitsche, M.
J.
:
Castelnuovo-Mumford regularity of seminormal simplicial affine semigroup rings
In: Journal of algebra,
368 (2012), p. 345-357
MIS-Preprint: 61/2010 DOI: 10.1016/j.jalgebra.2012.05.004 ARXIV: http://arxiv.org/abs/1108.1737Nitsche, M.
J.
:
Castelnuovo-Mumford regularity and reduction number of smooth monomial curves in \(\mathbb{P}^5\)
In: Proceedings of the American Mathematical Society,
140 (2012) 9, p. 2937-2944
DOI: 10.1090/S0002-9939-2012-10934-7Nittka, R.
:
A note on the implicit function theorem for quasi-linear eigenvalue problems
In: Nonlinear analysis / A,
75 (2012) 5, p. 2806-2811
DOI: 10.1016/j.na.2011.11.023 ARXIV: http://de.arxiv.org/abs/1109.5089Nittka, R.
:
Projections onto convex sets and \(L^p\)-quasi-contractivity of semigroups
In: Archiv der Mathematik,
98 (2012) 4, p. 341-353
DOI: 10.1007/s00013-012-0374-2Nogovitsyn, E.
A. and Y. A. Budkov:
Self-consistent field theory investigation of behavior of hyaluronic acid chains in
aqueous salt solution
In: Physica / A,
391 (2012) 8, p. 2507-2517
MIS-Preprint: 45/2010 DOI: 10.1016/j.physa.2011.12.040Oikonomou, V.
K.:
De Sitter cosmic strings and supersymmetry
In: General relativity and gravitation,
44 (2012) 5, p. 1285-1297
DOI: 10.1007/s10714-012-1339-2 ARXIV: http://arxiv.org/abs/1104.3241Oseledets, I.
V.:
Improved n-term Karatsuba-like formulas in GF(2)
In: IEEE transactions on computers,
60 (2012) 8, p. 1212-1216
DOI: 10.1109/TC.2010.233Oseledets, I.
V. and S. Dolgov:
Solution of linear systems and matrix inversion in the TT-format
In: SIAM journal on scientific computing,
34 (2012) 5, p. A2718-A2739
MIS-Preprint: 19/2011 DOI: 10.1137/110833142Oseledets, I.
V. and A.
Yu. Mikhalev:
Representation of quasiseparable matrices using excluded sums and equivalent charges
In: Linear algebra and its applications,
436 (2012) 3, p. 699-708
DOI: 10.1016/j.laa.2011.07.041Ostermeier, L.
; Hellmuth, M.
and P. F. Stadler:
The cartesian product of hypergraphs
In: Journal of graph theory,
70 (2012) 2, p. 180-196
DOI: 10.1002/jgt.20609Otto, C.
; Stadler, P.
F. and S.
Hoffmann:
Fast and sensitive mapping of bisulfite-treated sequencing data
In: Bioinformatics,
28 (2012) 13, p. 1698-1704
DOI: 10.1093/bioinformatics/bts254 LINK: http://www.bioinf.uni-leipzig.de/Publications/PREPRINTS/12-015.pdfOttosson, N.
; Romanova, A.
O. ; Söderström, J.
; Björneholm, O.
; Öhrwall, G.
and M. V. Fedorov:
Molecular sinkers : X-ray photoemission and atomistic simulations of benzoic acid
and benzoate at the aqueous solution/vapor interface
In: The journal of physical chemistry / B,
116 (2012) 43, p. 13017-13023
DOI: 10.1021/jp300956jPalmer, D.
S. ; McDonagh, J.
L. ; Mitchell, J.
B. O. ; van Mourik, T.
and M. V. Fedorov:
First-principles calculation of the intrinsic aqueous solubility of crystalline druglike
molecules
In: Journal of chemical theory and computation,
8 (2012) 9, p. 3322-3337
DOI: 10.1021/ct300345mPenington, N.
and H. C. Tuckwell:
Properties of \(I_A\) in a serotonergic neuron of the dorsal raphe nucleus
In: Brain research,
1449 (2012), p. 60-68
DOI: 10.1016/j.brainres.2012.02.026Piraveenan, M.
; Prokopenko, M.
and A.
Zomaya:
Assortative mixing in directed biological networks
In: IEEE ACM transactions on computational biology and bioinformatics,
9 (2012) 1, p. 66-78
DOI: 10.1109/TCBB.2010.80Plaumann, D.
; Sturmfels, B.
and C.
Vinzant:
Computing linear matrix representations of Helton-Vinnikov curves
In: Mathematical methods in systems, optimization, and control : Festschrift in honor
of J. William Helton / H.
Dym... (eds.)
Basel : Springer, 2012. - P. 259-277
(Operator theory : advances and applications ; 222)
DOI: 10.1007/978-3-0348-0411-0_19 ARXIV: http://arxiv.org/abs/1011.6057Poppe, S.
; Benner, P.
and T. Elze:
A predictive approach to nonparametric inference for adaptive sequential sampling
of psychophysical experiments
In: Journal of mathematical psychology,
56 (2012) 3, p. 179-195
MIS-Preprint: 26/2012 DOI: 10.1016/j.jmp.2012.04.002Przybilla, J.
; Galle, J.
and T. Rohlf:
Is adult stem cell aging driven by conflicting modes of chromatin remodeling?
In: Bioessays,
34 (2012) 10, p. 841-848
DOI: 10.1002/bies.201100190Ramm, A.
G.:
Stability of solutions to abstract evolution equations with delay
In: Journal of mathematical analysis and applications,
396 (2012) 2, p. 523-527
MIS-Preprint: 50/2011 DOI: 10.1016/j.jmaa.2012.06.033Ranestad, K.
and B. Sturmfels:
On the convex hull of a space curve
In: Advances in geometry,
12 (2012) 1, p. 157-178
DOI: 10.1515/advgeom.2011.021 ARXIV: http://arxiv.org/abs/0912.2986Ratkova, E.
L.:
A Comparative analysis of models for hydration free energy calculations within the
RISM theory of integral equations
In: Russian journal of physical chemistry / A,
86 (2012) 6, p. 992-998
DOI: 10.1134/S0036024412060222Ratkova, E.
L.:
A semiempirical model for estimating the hydration free energy of neutral nonpolar
compounds
In: Russian journal of physical chemistry / A,
86 (2012) 10, p. 1557-1562
DOI: 10.1134/S0036024412100196Ren, Q.
; Kolwankar, K.
M.
; Samal, A.
and J. Jost:
Hopf bifurcation in the evolution of networks driven by spike-timing-dependent plasticity
In: Physical review / E,
86 (2012) 5, 056103
MIS-Preprint: 38/2013 DOI: 10.1103/PhysRevE.86.056103Rohlf, T.
; Steiner, L.
; Przybilla, J.
; Prohaska, S.
J. ; Binder, H.
and J.
Galle:
Modeling the dynamic epigenome : from histone modifications towards self-organizing
chromatin
In: Epigenomics,
4 (2012) 2, p. 205-219
DOI: 10.2217/epi.11.117Savostyanov, D.
V.:
QTT-rank-one vectors with QTT-rank-one and full-rank Fourier images
In: Linear algebra and its applications,
436 (2012) 9, p. 3215-3224
MIS-Preprint: 45/2011 DOI: 10.1016/j.laa.2011.11.008Schlichting, A.
:
The Eyring-Kramers formula for Poincaré and logoarithmic Sobolev inequalities
Dissertation, Universität Leipzig, 2012
LINK: http://nbn-resolving.de/urn:nbn:de:bsz:15-qucosa-97965Schmidtchen, H.
and U.
Behn:
Randomly evolving idiotypic networks : modular mean field theory
In: Physical review / E,
86 (2012) 1, 011931
DOI: 10.1103/PhysRevE.86.011931 ARXIV: http://arxiv.org/abs/1201.3530Schmidtchen, H.
; Thüne, M.
and U.
Behn:
Randomly evolving idiotypic networks : structural properties and architecture
In: Physical review / E,
86 (2012) 1, 011930
DOI: 10.1103/PhysRevE.86.011930 ARXIV: http://arxiv.org/abs/1201.3618Schmidtke, C.
; Findeiss, S.
; Sharma, C.
M. ; Kuhfuss, J.
; Hoffmann, S.
; Vogel, J.
; Stadler, P.
F. and U.
Bonas:
Genome-wide transcriptome analysis of the plant pathogen Xanthomonas identifies sRNAs
with putative virulence functions
In: Nucleic acids research,
40 (2012) 5, p. 2020-2031
DOI: 10.1093/nar/gkr904 LINK: http://www.bioinf.uni-leipzig.de/publications/10-035Sergiievskyi, V.
:
Modelling of solvation thermodynamics using a combination of reference intercation
site model theory and multi-grid numerical methods
Dissertation, University of Strathclyde, 2012
Sergiievskyi, V.
and M. V. Fedorov:
3DRISM multigrid algorithm for fast solvation free energy calculations
In: Journal of chemical theory and computation,
8 (2012) 6, p. 2062-2070
DOI: 10.1021/ct200815vSergiievskyi, V.
and A. Frolov:
A universal bridge functional for infinitely diluted solutions : a case study for
Lennard-Jones spheres of different diameter
In: Russian journal of physical chemistry / A,
86 (2012) 8, p. 1254-1260
DOI: 10.1134/S0036024412080122 ARXIV: http://arxiv.org/abs/1111.2257Siefring, R.
L.:
Intersection theory of punctured pseudoholomorphic curves
In: Geometry and topology,
15 (2012) 4, p. 2351-2457
DOI: 10.2140/gt.2011.15.2351 ARXIV: http://arxiv.org/abs/0907.0470Spadaro, E.
:
Nondoubling \(A_{\infty} \) weights
In: Advances in calculus of variations,
5 (2012) 3, p. 345-354
DOI: 10.1515/acv.2011.019 LINK: http://personal-homepages.mis.mpg.de/spadaro/art9.pdfSteiner, J.
; Schäfer, R.
; Wieczorek, H.
; McCord, J.
and F. Otto:
Formation and coarsening of the concertina magnetization pattern in elongated thin-film
elements
In: Physical review / B,
85 (2012) 10, 104407
MIS-Preprint: 40/2011 DOI: 10.1103/PhysRevB.85.104407 ARXIV: https://arxiv.org/abs/1106.3573Steiner, L.
; Hopp, L.
; Wirth, H.
; Galle, J.
; Binder, H.
; Prohaska, S.
J. and T. Rohlf:
A global genome segmentation method for exploration of epigenetic patterns
In: PLoS one,
7 (2012) 10, e46811
DOI: 10.1371/journal.pone.0046811 LINK: http://www.bioinf.uni-leipzig.de/publications/12-002Sturmfels, B.
:
Geometry of higher-order Markov chains
In: Journal of algebraic statistics,
3 (2012) 1, p. 1-10
DOI: 10.18409/jas.v3i1.13 ARXIV: http://arxiv.org/abs/1207.1899Sturmfels, B.
and V.
Welker:
Commutative algebra of statistical ranking
In: Journal of algebra,
361 (2012), p. 264-286
DOI: 10.1016/j.jalgebra.2012.03.028 ARXIV: http://arxiv.org/abs/1101.1597Tippmann, S.
C. ; Ivanek, R.
; Gaidatzis, D.
; Schöler, A.
; Hoerner, L.
; Nimwegen, E.
v.
; Stadler, P.
F. ; Stadler, M.
B. and D.
Schübeler:
Chromatin measurements reveal contributions of synthesis and decay to steady-state
mRNA levels
In: Molecular systems biology,
8 (2012) 1, 593
DOI: 10.1038/msb.2012.23Tran, T.
D.
:
Information geometry and the Wright-Fisher model of mathematical population genetics
Dissertation, Universität Leipzig, 2012
LINK: http://nbn-resolving.de/urn:nbn:de:bsz:15-qucosa-90508Tuckwell, H.
C.:
Quantitative aspects of L-type Ca2+ currents
In: Progress in neurobiology,
96 (2012) 1, p. 1-31
MIS-Preprint: 41/2010 DOI: 10.1016/j.pneurobio.2011.09.010Tuckwell, H.
C. and J. Jost:
Analysis of inverse stochastic resonance and the long-term firing of Hodgkin-Huxley
neurons with Gaussian white noise
In: Physica / A,
391 (2012) 22, p. 5311-5325
MIS-Preprint: 13/2012 DOI: 10.1016/j.physa.2012.06.019 ARXIV: http://arxiv.org/abs/1202.2491Turc, C.
; Ovall, J.
S. and A.
Anand:
Well-conditioned boundary integral equations for two-dimensional sound-hard scattering
problems in domains with corners
In: Journal of integral equations and applications,
24 (2012) 3, p. 321-358
MIS-Preprint: 43/2010 DOI: 10.1216/JIE-2012-24-3-321Typlt, M.
; Englitz, B.
; Sonntag, M.
; Dehmel, S.
; Kopp-Scheinpflug, C.
and R. Rübsamen:
Multidimensional characterization and differentiation of neurons in the anteroventral
cochlear nucleus
In: PLoS one,
7 (2012) 1, e29965
DOI: 10.1371/journal.pone.0029965Wang, X.
R.
; Miller, J.
M. ; Lizier, J.
T. ; Prokopenko, M.
and L.
F. Rossi:
Quantifying and tracing information cascades in swarms
In: PLoS one,
7 (2012) 7, e40084
DOI: 10.1371/journal.pone.0040084Washietl, S.
; Hofacker, I.
L. ; Stadler, P.
F. and M.
Kellis:
RNA folding with soft constraints : reconciliation of probing data and thermodynamic
secondary structure prediction
In: Nucleic acids research,
40 (2012) 10, p. 4261-4272
DOI: 10.1093/nar/gks009Weis, S.
:
Duality of non-exposed faces
In: Journal of convex analysis,
19 (2012) 3, p. 815-835
MIS-Preprint: 76/2011 ARXIV: http://arxiv.org/abs/1107.2319 LINK: http://www.heldermann.de/JCA/JCA19/JCA193/jca19042.htmWeis, S.
and A. Knauf:
Entropy distance : new quantum phenomena
In: Journal of mathematical physics,
53 (2012) 10, 102206
MIS-Preprint: 72/2011 DOI: 10.1063/1.4757652Will, S.
; Joshi, T.
; Hofacker, I.
L. ; Stadler, P.
F. and R.
Backofen:
LocARNA-P : accurate boundary prediction and improved detection of structural RNAs
In: RNA,
18 (2012) 5, p. 900-914
DOI: 10.1261/rna.029041.111Wolpert, D.
; Harré, M.
; Olbrich, E.
; Bertschinger, N.
and J. Jost:
Hysteresis effects of changing the parameters of noncooperative games
In: Physical review / E,
85 (2012) 3, 036102
DOI: 10.1103/PhysRevE.85.036102 ARXIV: http://arxiv.org/abs/1010.5749Zapolsky, F.
:
Reeb graph and quasi-states on the two-dimensional torus
In: Israel journal of mathematics,
188 (2012) 1, p. 111-121
MIS-Preprint: 51/2010 DOI: 10.1007/s11856-011-0095-4Zapolsky, F.
:
Isotopy-invariant topological measures on closed orientable surfaces of higher genus
In: Mathematische Zeitschrift,
270 (2012) 1/2, p. 133-143
DOI: 10.1007/s00209-010-0788-0Zhang, L.
; Wu, J.
and S. Fei:
Universal upper bound for the Holevo information induced by a quantum operation
In: Physics Letters / A,
376 (2012) 47/48, p. 3588-3592
MIS-Preprint: 20/2013 DOI: 10.1016/j.physleta.2012.10.014 ARXIV: http://arxiv.org/abs/1110.5979Zhao, M.
; Fei, S.
and X. Li-Jost:
Complete entanglement witness for quantum teleportation
In: Physical review / A,
85 (2012) 5, 054301
MIS-Preprint: 52/2012 DOI: 10.1103/PhysRevA.85.054301Zhao, M.
; Li, Z.
; Li-Jost, X.
and S. Fei:
Multiqubit quantum teleportation
In: Journal of physics / A,
45 (2012) 40, 405303
MIS-Preprint: 56/2012 DOI: 10.1088/1751-8113/45/40/405303Zhou, C.
; Zhang, T.
; Fei, S.
; Jing, N.
and X. Li-Jost:
Local unitary equivalence of arbitrary dimensional bipartite quantum states
In: Physical review / A,
86 (2012) 1, 010303(R)
MIS-Preprint: 45/2012 DOI: 10.1103/PhysRevA.86.010303Zhu, X.
and S. Fei:
Improved lower and upper bounds for entanglement of formation
In: Physical review / A,
86 (2012) 5, 054301
MIS-Preprint: 19/2013 DOI: 10.1103/PhysRevA.86.054301 ARXIV: http://arxiv.org/abs/1211.0464Zhu, X.
; Zhao, M.
and S. Fei:
Lower bound of multipartite concurrence based on sub-quantum state decomposition
In: Physical review / A,
86 (2012) 2, 022307
MIS-Preprint: 55/2012 DOI: 10.1103/PhysRevA.86.022307 ARXIV: http://arxiv.org/abs/1208.1745Zocher, B.
; Horsdal, M.
and B.
Rosenow:
Proposed detection of the topological phase in ring-shaped semiconductor-superconductor
nanowires using Coulomb blockade transport
In: Physical review letters,
109 (2012) 22, 227001
DOI: 10.1103/PhysRevLett.109.227001